RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR11, Length 258 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR11snR11 YDR524C-BQ3E6R4 66 aa0.21□□□□□ -2.38
snR11snR11 UTP20P35194 2493 aaKnown RBP0.21□□□□□ -2.38
snR11snR11 YGL258W-AQ3E740 77 aa0.19□□□□□ -2.38
snR11snR11 ULS1Q08562 1619 aa0.16□□□□□ -2.38
snR11snR11 PEP1P32319 1579 aa0.15□□□□□ -2.38
snR11snR11 COA2Q3E823 68 aa0.15□□□□□ -2.39
snR11snR11 YOR072W-BQ3E832 53 aa0.15□□□□□ -2.39
snR11snR11 USO1P25386 1790 aa0.11□□□□□ -2.39
snR11snR11 TOR1P35169 2470 aa0.11□□□□□ -2.39
snR11snR11 NUP192P47054 1683 aa0.11□□□□□ -2.39
snR11snR11 BUD3P25558 1636 aa0.09□□□□□ -2.39
snR11snR11 STU1P38198 1513 aa0.04□□□□□ -2.4
snR11snR11 YBR056W-AI2HB52 66 aa0.02□□□□□ -2.41
snR11snR11 RKR1Q04781 1562 aa0.02□□□□□ -2.41
snR11snR11 FIG2P25653 1609 aa0.02□□□□□ -2.41
snR11snR11 NUP170P38181 1502 aa-0.01□□□□□ -2.41
snR11snR11 YOR316C-AQ3E806 69 aa-0.02□□□□□ -2.41
snR11snR11 ATG2P53855 1592 aa-0.02□□□□□ -2.41
snR11snR11 YHR050W-AQ05451 56 aa-0.04□□□□□ -2.42
snR11snR11 HIR3P47171 1648 aa-0.05□□□□□ -2.42
snR11snR11 THO2P53552 1597 aaKnown RBP-0.07□□□□□ -2.42
snR11snR11 YJL133C-AQ3E7A3 74 aa-0.08□□□□□ -2.42
snR11snR11 YLR342W-AQ3E810 57 aa-0.1□□□□□ -2.43
snR11snR11 GCN2P15442 1659 aa-0.11□□□□□ -2.43
snR11snR11 FLO1P32768 1537 aa-0.12□□□□□ -2.43
snR11snR11 YDR034C-AP0C289 58 aa-0.13□□□□□ -2.43
snR11snR11 DDR2P89113 61 aa-0.15□□□□□ -2.43
snR11snR11 COX9P07255 59 aa-0.19□□□□□ -2.44
snR11snR11 TOR2P32600 2474 aaKnown RBP-0.19□□□□□ -2.44
snR11snR11 RPL29P05747 59 aaPredicted RBP-0.2□□□□□ -2.44
snR11snR11 FMP27Q06179 2628 aa-0.22□□□□□ -2.44
snR11snR11 YPR117WQ06116 2489 aa-0.26□□□□□ -2.45
snR11snR11 DYN1P36022 4092 aa-0.28□□□□□ -2.45
snR11snR11 MEC1P38111 2368 aa-0.28□□□□□ -2.45
snR11snR11 Q0017Q9ZZX8 53 aa-0.29□□□□□ -2.46
snR11snR11 YHR073W-AP0C5N7 58 aa-0.34□□□□□ -2.46
snR11snR11 SMX2P40204 77 aaKnown RBP-0.37□□□□□ -2.47
snR11snR11 YJL127C-BQ3E828 52 aa-0.37□□□□□ -2.47
snR11snR11 YML054C-AQ3E809 52 aa-0.38□□□□□ -2.47
snR11snR11 MLP2P40457 1679 aa-0.49□□□□□ -2.49
snR11snR11 TEL1P38110 2787 aa-0.5□□□□□ -2.49
snR11snR11 TOM7P53507 60 aa-0.51□□□□□ -2.49
snR11snR11 CHC1P22137 1653 aaKnown RBP-0.57□□□□□ -2.5
snR11snR11 CSF1Q12150 2958 aa-0.58□□□□□ -2.5
snR11snR11 TRA1P38811 3744 aa-0.6□□□□□ -2.51
snR11snR11 GCN1P33892 2672 aaKnown RBP-0.61□□□□□ -2.51
snR11snR11 MDN1Q12019 4910 aaKnown RBP-0.63□□□□□ -2.51
snR11snR11 CUP1-1P0CX80 61 aa-0.68□□□□□ -2.52
snR11snR11 CUP1-2P0CX81 61 aa-0.68□□□□□ -2.52
snR11snR11 PMP3P87284 55 aa-0.68□□□□□ -2.52
snR11snR11 HOR7Q05827 59 aa-0.77□□□□□ -2.53
snR11snR11 IRA1P18963 3092 aa-0.78□□□□□ -2.53
snR11snR11 YMR105W-AQ8TGS8 64 aa-0.9□□□□□ -2.55
snR11snR11 IRA2P19158 3079 aa-0.94□□□□□ -2.56
snR11snR11 NUM1Q00402 2748 aa-1.03□□□□□ -2.57
snR11snR11 NCE101Q02820 53 aa-1.05□□□□□ -2.58
snR11snR11 YLL066W-BQ8TGJ7 56 aa-1.05□□□□□ -2.58
snR11snR11 VPS13Q07878 3144 aa-1.07□□□□□ -2.58
snR11snR11 RPL39P04650 51 aa-1.55□□□□□ -2.66
snR11snR11 TOM1Q03280 3268 aa-1.79□□□□□ -2.7
snR11snR11 YIL046W-AQ3E7Z4 54 aa-2.01□□□□□ -2.73
snR11snR11 Q0297Q9ZZV8 51 aa-2.25□□□□□ -2.77
snR11snR11 YDR034W-BQ6Q5X2 51 aa-3.56□□□□□ -2.98
Retrieved 63 of 5,963 RNA–protein pairs in 5.2 ms