RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C YOR093CQ12275 1648 aa0.07□□□□□ -2.4
SWT1YOR166C YLL006W-AQ3E814 58 aa0.06□□□□□ -2.4
SWT1YOR166C YPR010C-AA5Z2X5 72 aa0.06□□□□□ -2.4
SWT1YOR166C BUD3P25558 1636 aa0.05□□□□□ -2.4
SWT1YOR166C YGL258W-AQ3E740 77 aa0.05□□□□□ -2.4
SWT1YOR166C YOR072W-BQ3E832 53 aa0.05□□□□□ -2.4
SWT1YOR166C ULS1Q08562 1619 aa0.04□□□□□ -2.4
SWT1YOR166C NUP192P47054 1683 aa0.04□□□□□ -2.4
SWT1YOR166C USO1P25386 1790 aa0.03□□□□□ -2.4
SWT1YOR166C STU1P38198 1513 aa0.02□□□□□ -2.41
SWT1YOR166C PEP1P32319 1579 aa0.02□□□□□ -2.41
SWT1YOR166C RKR1Q04781 1562 aa0.02□□□□□ -2.41
SWT1YOR166C NUP170P38181 1502 aa0.01□□□□□ -2.41
SWT1YOR166C HIR3P47171 1648 aa0.01□□□□□ -2.41
SWT1YOR166C FIG2P25653 1609 aa0□□□□□ -2.41
SWT1YOR166C UTP20P35194 2493 aaKnown RBP0□□□□□ -2.41
SWT1YOR166C ATG2P53855 1592 aa0□□□□□ -2.41
SWT1YOR166C YHR050W-AQ05451 56 aa0□□□□□ -2.41
SWT1YOR166C THO2P53552 1597 aaKnown RBP-0.01□□□□□ -2.41
SWT1YOR166C YOR316C-AQ3E806 69 aa-0.01□□□□□ -2.41
SWT1YOR166C TOR1P35169 2470 aa-0.02□□□□□ -2.41
SWT1YOR166C GCN2P15442 1659 aa-0.02□□□□□ -2.41
SWT1YOR166C FLO1P32768 1537 aa-0.03□□□□□ -2.41
SWT1YOR166C YDR034C-AP0C289 58 aa-0.05□□□□□ -2.42
SWT1YOR166C COX9P07255 59 aa-0.06□□□□□ -2.42
SWT1YOR166C DDR2P89113 61 aa-0.06□□□□□ -2.42
SWT1YOR166C YJL133C-AQ3E7A3 74 aa-0.06□□□□□ -2.42
SWT1YOR166C YLR342W-AQ3E810 57 aa-0.06□□□□□ -2.42
SWT1YOR166C RPL29P05747 59 aaPredicted RBP-0.06□□□□□ -2.42
SWT1YOR166C YPR117WQ06116 2489 aa-0.08□□□□□ -2.42
SWT1YOR166C FMP27Q06179 2628 aa-0.08□□□□□ -2.42
SWT1YOR166C Q0017Q9ZZX8 53 aa-0.08□□□□□ -2.42
SWT1YOR166C MEC1P38111 2368 aa-0.09□□□□□ -2.42
SWT1YOR166C GCN1P33892 2672 aaKnown RBP-0.1□□□□□ -2.42
SWT1YOR166C TOR2P32600 2474 aaKnown RBP-0.1□□□□□ -2.43
SWT1YOR166C YHR073W-AP0C5N7 58 aa-0.1□□□□□ -2.43
SWT1YOR166C YML054C-AQ3E809 52 aa-0.1□□□□□ -2.43
SWT1YOR166C SMX2P40204 77 aaKnown RBP-0.13□□□□□ -2.43
SWT1YOR166C YJL127C-BQ3E828 52 aa-0.13□□□□□ -2.43
SWT1YOR166C TEL1P38110 2787 aa-0.13□□□□□ -2.43
SWT1YOR166C MLP2P40457 1679 aa-0.15□□□□□ -2.43
SWT1YOR166C CHC1P22137 1653 aaKnown RBP-0.17□□□□□ -2.44
SWT1YOR166C DYN1P36022 4092 aa-0.18□□□□□ -2.44
SWT1YOR166C MDN1Q12019 4910 aaKnown RBP-0.19□□□□□ -2.44
SWT1YOR166C CUP1-1P0CX80 61 aa-0.19□□□□□ -2.44
SWT1YOR166C CUP1-2P0CX81 61 aa-0.19□□□□□ -2.44
SWT1YOR166C PMP3P87284 55 aa-0.19□□□□□ -2.44
SWT1YOR166C TOM7P53507 60 aa-0.2□□□□□ -2.44
SWT1YOR166C NUM1Q00402 2748 aa-0.21□□□□□ -2.44
SWT1YOR166C YMR105W-AQ8TGS8 64 aa-0.21□□□□□ -2.44
SWT1YOR166C HOR7Q05827 59 aa-0.22□□□□□ -2.45
SWT1YOR166C CSF1Q12150 2958 aa-0.24□□□□□ -2.45
SWT1YOR166C TRA1P38811 3744 aa-0.27□□□□□ -2.45
SWT1YOR166C YLL066W-BQ8TGJ7 56 aa-0.31□□□□□ -2.46
SWT1YOR166C IRA1P18963 3092 aa-0.32□□□□□ -2.46
SWT1YOR166C NCE101Q02820 53 aa-0.33□□□□□ -2.46
SWT1YOR166C IRA2P19158 3079 aa-0.35□□□□□ -2.47
SWT1YOR166C VPS13Q07878 3144 aa-0.42□□□□□ -2.48
SWT1YOR166C TOM1Q03280 3268 aa-0.48□□□□□ -2.49
SWT1YOR166C RPL39P04650 51 aa-0.48□□□□□ -2.49
SWT1YOR166C Q0297Q9ZZV8 51 aa-0.59□□□□□ -2.5
SWT1YOR166C YIL046W-AQ3E7Z4 54 aa-0.61□□□□□ -2.51
SWT1YOR166C YDR034W-BQ6Q5X2 51 aa-0.84□□□□□ -2.54
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms