RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C BUD3P25558 1636 aa0.22□□□□□ -2.37
VPS55YJR044C YOR093CQ12275 1648 aa0.21□□□□□ -2.38
VPS55YJR044C YGR146C-AQ8TGT9 53 aa0.21□□□□□ -2.38
VPS55YJR044C NUP192P47054 1683 aa0.21□□□□□ -2.38
VPS55YJR044C ULS1Q08562 1619 aa0.2□□□□□ -2.38
VPS55YJR044C YBR056W-AI2HB52 66 aa0.18□□□□□ -2.38
VPS55YJR044C RKR1Q04781 1562 aa0.18□□□□□ -2.38
VPS55YJR044C HIR3P47171 1648 aa0.17□□□□□ -2.38
VPS55YJR044C PEP1P32319 1579 aa0.17□□□□□ -2.38
VPS55YJR044C FMP27Q06179 2628 aa0.15□□□□□ -2.39
VPS55YJR044C NUP170P38181 1502 aa0.15□□□□□ -2.39
VPS55YJR044C YOR192C-CQ3E736 78 aa0.15□□□□□ -2.39
VPS55YJR044C THO2P53552 1597 aaKnown RBP0.15□□□□□ -2.39
VPS55YJR044C YOR072W-BQ3E832 53 aa0.14□□□□□ -2.39
VPS55YJR044C TOR2P32600 2474 aaKnown RBP0.13□□□□□ -2.39
VPS55YJR044C STU1P38198 1513 aa0.13□□□□□ -2.39
VPS55YJR044C YPR010C-AA5Z2X5 72 aa0.13□□□□□ -2.39
VPS55YJR044C DYN1P36022 4092 aa0.13□□□□□ -2.39
VPS55YJR044C ATG2P53855 1592 aa0.12□□□□□ -2.39
VPS55YJR044C YGL258W-AQ3E740 77 aa0.1□□□□□ -2.39
VPS55YJR044C YLL006W-AQ3E814 58 aa0.1□□□□□ -2.39
VPS55YJR044C MEC1P38111 2368 aa0.08□□□□□ -2.4
VPS55YJR044C YPR117WQ06116 2489 aa0.08□□□□□ -2.4
VPS55YJR044C TEL1P38110 2787 aa0.07□□□□□ -2.4
VPS55YJR044C FIG2P25653 1609 aa0.07□□□□□ -2.4
VPS55YJR044C YOR316C-AQ3E806 69 aa0.07□□□□□ -2.4
VPS55YJR044C GCN2P15442 1659 aa0.07□□□□□ -2.4
VPS55YJR044C YHR050W-AQ05451 56 aa0.06□□□□□ -2.4
VPS55YJR044C FLO1P32768 1537 aa0.04□□□□□ -2.4
VPS55YJR044C COX9P07255 59 aa0.04□□□□□ -2.4
VPS55YJR044C MDN1Q12019 4910 aaKnown RBP0.04□□□□□ -2.4
VPS55YJR044C GCN1P33892 2672 aaKnown RBP0.02□□□□□ -2.41
VPS55YJR044C DDR2P89113 61 aa0□□□□□ -2.41
VPS55YJR044C TRA1P38811 3744 aa-0.02□□□□□ -2.41
VPS55YJR044C YDR034C-AP0C289 58 aa-0.02□□□□□ -2.41
VPS55YJR044C YJL133C-AQ3E7A3 74 aa-0.02□□□□□ -2.41
VPS55YJR044C YLR342W-AQ3E810 57 aa-0.03□□□□□ -2.41
VPS55YJR044C CSF1Q12150 2958 aa-0.05□□□□□ -2.42
VPS55YJR044C RPL29P05747 59 aaPredicted RBP-0.05□□□□□ -2.42
VPS55YJR044C MLP2P40457 1679 aa-0.05□□□□□ -2.42
VPS55YJR044C YHR073W-AP0C5N7 58 aa-0.06□□□□□ -2.42
VPS55YJR044C Q0017Q9ZZX8 53 aa-0.06□□□□□ -2.42
VPS55YJR044C NUM1Q00402 2748 aa-0.07□□□□□ -2.42
VPS55YJR044C YML054C-AQ3E809 52 aa-0.08□□□□□ -2.42
VPS55YJR044C CHC1P22137 1653 aaKnown RBP-0.1□□□□□ -2.43
VPS55YJR044C IRA1P18963 3092 aa-0.1□□□□□ -2.43
VPS55YJR044C SMX2P40204 77 aaKnown RBP-0.11□□□□□ -2.43
VPS55YJR044C YJL127C-BQ3E828 52 aa-0.14□□□□□ -2.43
VPS55YJR044C IRA2P19158 3079 aa-0.15□□□□□ -2.43
VPS55YJR044C VPS13Q07878 3144 aa-0.19□□□□□ -2.44
VPS55YJR044C CUP1-1P0CX80 61 aa-0.21□□□□□ -2.44
VPS55YJR044C CUP1-2P0CX81 61 aa-0.21□□□□□ -2.44
VPS55YJR044C PMP3P87284 55 aa-0.22□□□□□ -2.44
VPS55YJR044C TOM1Q03280 3268 aa-0.23□□□□□ -2.45
VPS55YJR044C HOR7Q05827 59 aa-0.23□□□□□ -2.45
VPS55YJR044C YMR105W-AQ8TGS8 64 aa-0.25□□□□□ -2.45
VPS55YJR044C TOM7P53507 60 aa-0.27□□□□□ -2.45
VPS55YJR044C YLL066W-BQ8TGJ7 56 aa-0.39□□□□□ -2.47
VPS55YJR044C NCE101Q02820 53 aa-0.42□□□□□ -2.48
VPS55YJR044C YDR034W-BQ6Q5X2 51 aa-0.42□□□□□ -2.48
VPS55YJR044C Q0297Q9ZZV8 51 aa-0.49□□□□□ -2.49
VPS55YJR044C YIL046W-AQ3E7Z4 54 aa-0.51□□□□□ -2.49
VPS55YJR044C RPL39P04650 51 aa-0.56□□□□□ -2.5
Retrieved 63 of 5,963 RNA–protein pairs in 9.6 ms