RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W USO1P25386 1790 aa0.42□□□□□ -2.34
RPL40AYIL148W YOR093CQ12275 1648 aa0.42□□□□□ -2.34
RPL40AYIL148W RPS27BP38711 82 aa0.41□□□□□ -2.34
RPL40AYIL148W YLL006W-AQ3E814 58 aa0.41□□□□□ -2.34
RPL40AYIL148W PEP1P32319 1579 aa0.4□□□□□ -2.34
RPL40AYIL148W STU1P38198 1513 aa0.4□□□□□ -2.35
RPL40AYIL148W NUP170P38181 1502 aa0.39□□□□□ -2.35
RPL40AYIL148W THO2P53552 1597 aaKnown RBP0.39□□□□□ -2.35
RPL40AYIL148W NUP192P47054 1683 aa0.39□□□□□ -2.35
RPL40AYIL148W NUP188P52593 1655 aaKnown RBP0.39□□□□□ -2.35
RPL40AYIL148W SMX2P40204 77 aaKnown RBP0.38□□□□□ -2.35
RPL40AYIL148W RPS29AP41057 56 aaKnown RBP0.38□□□□□ -2.35
RPL40AYIL148W DDR2P89113 61 aa0.37□□□□□ -2.35
RPL40AYIL148W YJL133C-AQ3E7A3 74 aa0.37□□□□□ -2.35
RPL40AYIL148W YOR316C-AQ3E806 69 aa0.37□□□□□ -2.35
RPL40AYIL148W YLR342W-AQ3E810 57 aa0.37□□□□□ -2.35
RPL40AYIL148W TAO3P40468 2376 aa0.37□□□□□ -2.35
RPL40AYIL148W BUD3P25558 1636 aa0.36□□□□□ -2.35
RPL40AYIL148W HIR3P47171 1648 aa0.36□□□□□ -2.35
RPL40AYIL148W ATG2P53855 1592 aa0.34□□□□□ -2.36
RPL40AYIL148W SEN1Q00416 2231 aaKnown RBP0.34□□□□□ -2.36
RPL40AYIL148W YDR034C-AP0C289 58 aa0.33□□□□□ -2.36
RPL40AYIL148W YHR050W-AQ05451 56 aa0.33□□□□□ -2.36
RPL40AYIL148W YML054C-AQ3E809 52 aa0.32□□□□□ -2.36
RPL40AYIL148W YJL127C-BQ3E828 52 aa0.32□□□□□ -2.36
RPL40AYIL148W GCN2P15442 1659 aa0.31□□□□□ -2.36
RPL40AYIL148W RPL29P05747 59 aaPredicted RBP0.31□□□□□ -2.36
RPL40AYIL148W MLP2P40457 1679 aa0.3□□□□□ -2.36
RPL40AYIL148W PMP3P87284 55 aa0.3□□□□□ -2.36
RPL40AYIL148W YHR073W-AP0C5N7 58 aa0.29□□□□□ -2.36
RPL40AYIL148W FLO1P32768 1537 aa0.28□□□□□ -2.36
RPL40AYIL148W FIG2P25653 1609 aa0.28□□□□□ -2.36
RPL40AYIL148W Q0017Q9ZZX8 53 aa0.28□□□□□ -2.36
RPL40AYIL148W CHC1P22137 1653 aaKnown RBP0.27□□□□□ -2.37
RPL40AYIL148W TOM7P53507 60 aa0.27□□□□□ -2.37
RPL40AYIL148W HOR7Q05827 59 aa0.25□□□□□ -2.37
RPL40AYIL148W YMR105W-AQ8TGS8 64 aa0.21□□□□□ -2.38
RPL40AYIL148W TOR1P35169 2470 aa0.2□□□□□ -2.38
RPL40AYIL148W UTP20P35194 2493 aaKnown RBP0.19□□□□□ -2.38
RPL40AYIL148W NCE101Q02820 53 aa0.18□□□□□ -2.38
RPL40AYIL148W TOR2P32600 2474 aaKnown RBP0.11□□□□□ -2.39
RPL40AYIL148W FMP27Q06179 2628 aa0.1□□□□□ -2.39
RPL40AYIL148W YLL066W-BQ8TGJ7 56 aa0.1□□□□□ -2.39
RPL40AYIL148W YPR117WQ06116 2489 aa0.09□□□□□ -2.39
RPL40AYIL148W MEC1P38111 2368 aa0.09□□□□□ -2.39
RPL40AYIL148W CUP1-1P0CX80 61 aa0.09□□□□□ -2.4
RPL40AYIL148W CUP1-2P0CX81 61 aa0.09□□□□□ -2.4
RPL40AYIL148W RPL39P04650 51 aa0.04□□□□□ -2.4
RPL40AYIL148W CSF1Q12150 2958 aa0.03□□□□□ -2.4
RPL40AYIL148W TEL1P38110 2787 aa0.03□□□□□ -2.41
RPL40AYIL148W GCN1P33892 2672 aaKnown RBP0.02□□□□□ -2.41
RPL40AYIL148W YBR056W-AI2HB52 66 aa0□□□□□ -2.41
RPL40AYIL148W IRA1P18963 3092 aa-0□□□□□ -2.41
RPL40AYIL148W DYN1P36022 4092 aa-0.01□□□□□ -2.41
RPL40AYIL148W TRA1P38811 3744 aa-0.02□□□□□ -2.41
RPL40AYIL148W TOM1Q03280 3268 aa-0.03□□□□□ -2.41
RPL40AYIL148W NUM1Q00402 2748 aa-0.03□□□□□ -2.41
RPL40AYIL148W IRA2P19158 3079 aa-0.05□□□□□ -2.42
RPL40AYIL148W MDN1Q12019 4910 aaKnown RBP-0.06□□□□□ -2.42
RPL40AYIL148W VPS13Q07878 3144 aa-0.07□□□□□ -2.42
RPL40AYIL148W YDR034W-BQ6Q5X2 51 aa-0.09□□□□□ -2.42
RPL40AYIL148W YIL046W-AQ3E7Z4 54 aa-0.11□□□□□ -2.43
RPL40AYIL148W Q0297Q9ZZV8 51 aa-0.14□□□□□ -2.43
Retrieved 63 of 5,963 RNA–protein pairs in 9.4 ms