RNA–Protein interactions for RNA: YDR457W

TOM1, Transcript of E3 ubiquitin ligase of the hect-domain class, yeastyeast

Gene TOM1, Length 9,807 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOM1YDR457W YIL177CP40434 1758 aa1.73□□□□□ -2.13
TOM1YDR457W YJL225CP40889 1758 aa1.73□□□□□ -2.13
TOM1YDR457W SEC7P11075 2009 aaKnown RBP1.72□□□□□ -2.13
TOM1YDR457W UTP10P42945 1769 aaKnown RBP1.72□□□□□ -2.13
TOM1YDR457W FKS3Q04952 1785 aa1.72□□□□□ -2.13
TOM1YDR457W HFA1P32874 2273 aa1.71□□□□□ -2.14
TOM1YDR457W TY4B-JP47024 1803 aa1.71□□□□□ -2.14
TOM1YDR457W YLR157W-EP0CF00 54 aa1.7□□□□□ -2.14
TOM1YDR457W RPL37AP49166 88 aaKnown RBP1.69□□□□□ -2.14
TOM1YDR457W MEC1P38111 2368 aa1.69□□□□□ -2.14
TOM1YDR457W PRP8P33334 2413 aaKnown RBP1.68□□□□□ -2.14
TOM1YDR457W TOR1P35169 2470 aa1.67□□□□□ -2.14
TOM1YDR457W YPR117WQ06116 2489 aa1.67□□□□□ -2.14
TOM1YDR457W RPS29BP41058 56 aaKnown RBP1.64□□□□□ -2.15
TOM1YDR457W ACC1Q00955 2233 aaKnown RBP1.64□□□□□ -2.15
TOM1YDR457W UTP20P35194 2493 aaKnown RBP1.64□□□□□ -2.15
TOM1YDR457W MYO1P08964 1928 aa1.62□□□□□ -2.15
TOM1YDR457W TOR2P32600 2474 aaKnown RBP1.62□□□□□ -2.15
TOM1YDR457W PMD1P32634 1753 aa1.61□□□□□ -2.15
TOM1YDR457W BPH1P25356 2167 aa1.6□□□□□ -2.15
TOM1YDR457W DUR1,2P32528 1835 aaKnown RBP1.59□□□□□ -2.15
TOM1YDR457W RPS29AP41057 56 aaKnown RBP1.58□□□□□ -2.16
TOM1YDR457W HKR1P41809 1802 aa1.56□□□□□ -2.16
TOM1YDR457W YDR210WQ03482 75 aa1.56□□□□□ -2.16
TOM1YDR457W POL2P21951 2222 aaKnown RBP1.56□□□□□ -2.16
TOM1YDR457W GSC2P40989 1895 aa1.55□□□□□ -2.16
TOM1YDR457W URA2P07259 2214 aaKnown RBP1.55□□□□□ -2.16
TOM1YDR457W RIF1P29539 1916 aa1.54□□□□□ -2.16
TOM1YDR457W ECM29P38737 1868 aa1.53□□□□□ -2.16
TOM1YDR457W SEC16P48415 2195 aaKnown RBP1.52□□□□□ -2.17
TOM1YDR457W MOT1P32333 1867 aa1.52□□□□□ -2.17
TOM1YDR457W FKS1P38631 1876 aaKnown RBP1.52□□□□□ -2.17
TOM1YDR457W BRR2P32639 2163 aaKnown RBP1.51□□□□□ -2.17
TOM1YDR457W YRF1-3P0CX14 1859 aa1.5□□□□□ -2.17
TOM1YDR457W YRF1-7P0CX15 1859 aa1.5□□□□□ -2.17
TOM1YDR457W YRF1-6P53819 1859 aa1.5□□□□□ -2.17
TOM1YDR457W GLT1Q12680 2145 aaKnown RBP1.48□□□□□ -2.17
TOM1YDR457W YBR056W-AI2HB52 66 aa1.46□□□□□ -2.18
TOM1YDR457W BEM2P39960 2167 aaKnown RBP1.46□□□□□ -2.18
TOM1YDR457W UBR1P19812 1950 aa1.44□□□□□ -2.18
TOM1YDR457W UBR2Q07963 1872 aa1.43□□□□□ -2.18
TOM1YDR457W LAA1P39526 2014 aa1.43□□□□□ -2.18
TOM1YDR457W SLH1P53327 1967 aaKnown RBP1.41□□□□□ -2.18
TOM1YDR457W STT4P37297 1900 aa1.41□□□□□ -2.18
TOM1YDR457W TOM1Q03280 3268 aa1.4□□□□□ -2.19
TOM1YDR457W CDC39P25655 2108 aaKnown RBP1.4□□□□□ -2.19
TOM1YDR457W FMP27Q06179 2628 aa1.4□□□□□ -2.19
TOM1YDR457W BLM10P43583 2143 aa1.38□□□□□ -2.19
TOM1YDR457W YLR422WQ06409 1932 aa1.36□□□□□ -2.19
TOM1YDR457W YHR086W-AQ3E746 53 aa1.36□□□□□ -2.19
TOM1YDR457W MDN1Q12019 4910 aaKnown RBP1.33□□□□□ -2.2
TOM1YDR457W CCH1P50077 2039 aa1.31□□□□□ -2.2
TOM1YDR457W CYR1P08678 2026 aaKnown RBP1.27□□□□□ -2.21
TOM1YDR457W GCN1P33892 2672 aaKnown RBP1.26□□□□□ -2.21
TOM1YDR457W FAS1P07149 2051 aaKnown RBP1.21□□□□□ -2.22
TOM1YDR457W VPS13Q07878 3144 aa1.14□□□□□ -2.23
TOM1YDR457W NUM1Q00402 2748 aa1.11□□□□□ -2.23
TOM1YDR457W TEL1P38110 2787 aa1.08□□□□□ -2.24
TOM1YDR457W DYN1P36022 4092 aa0.98□□□□□ -2.25
TOM1YDR457W IRA2P19158 3079 aa0.95□□□□□ -2.26
TOM1YDR457W IRA1P18963 3092 aa0.93□□□□□ -2.26
TOM1YDR457W CSF1Q12150 2958 aa0.79□□□□□ -2.28
TOM1YDR457W TRA1P38811 3744 aa0.71□□□□□ -2.3
Retrieved 63 of 5,963 RNA–protein pairs in 40.3 ms