RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C YGL258W-AQ3E740 77 aa0.27□□□□□ -2.37
ASM4YDL088C YBT1P32386 1661 aa0.26□□□□□ -2.37
ASM4YDL088C YPR010C-AA5Z2X5 72 aa0.25□□□□□ -2.37
ASM4YDL088C YLL006W-AQ3E814 58 aa0.25□□□□□ -2.37
ASM4YDL088C NUP170P38181 1502 aa0.24□□□□□ -2.37
ASM4YDL088C YOR072W-BQ3E832 53 aa0.24□□□□□ -2.37
ASM4YDL088C ULS1Q08562 1619 aa0.24□□□□□ -2.37
ASM4YDL088C NUP188P52593 1655 aaKnown RBP0.24□□□□□ -2.37
ASM4YDL088C TOR1P35169 2470 aa0.24□□□□□ -2.37
ASM4YDL088C YOR093CQ12275 1648 aa0.24□□□□□ -2.37
ASM4YDL088C STU1P38198 1513 aa0.23□□□□□ -2.37
ASM4YDL088C RKR1Q04781 1562 aa0.23□□□□□ -2.37
ASM4YDL088C THO2P53552 1597 aaKnown RBP0.22□□□□□ -2.37
ASM4YDL088C BUD3P25558 1636 aa0.21□□□□□ -2.38
ASM4YDL088C NUP192P47054 1683 aa0.2□□□□□ -2.38
ASM4YDL088C COX9P07255 59 aa0.2□□□□□ -2.38
ASM4YDL088C HIR3P47171 1648 aa0.2□□□□□ -2.38
ASM4YDL088C YOR316C-AQ3E806 69 aa0.19□□□□□ -2.38
ASM4YDL088C USO1P25386 1790 aa0.19□□□□□ -2.38
ASM4YDL088C ATG2P53855 1592 aa0.19□□□□□ -2.38
ASM4YDL088C SMX2P40204 77 aaKnown RBP0.18□□□□□ -2.38
ASM4YDL088C FIG2P25653 1609 aa0.17□□□□□ -2.38
ASM4YDL088C DDR2P89113 61 aa0.17□□□□□ -2.38
ASM4YDL088C YLR342W-AQ3E810 57 aa0.16□□□□□ -2.38
ASM4YDL088C YJL133C-AQ3E7A3 74 aa0.15□□□□□ -2.38
ASM4YDL088C YHR050W-AQ05451 56 aa0.15□□□□□ -2.39
ASM4YDL088C RPL29P05747 59 aaPredicted RBP0.14□□□□□ -2.39
ASM4YDL088C FLO1P32768 1537 aa0.14□□□□□ -2.39
ASM4YDL088C YDR034C-AP0C289 58 aa0.13□□□□□ -2.39
ASM4YDL088C YHR073W-AP0C5N7 58 aa0.13□□□□□ -2.39
ASM4YDL088C GCN2P15442 1659 aa0.12□□□□□ -2.39
ASM4YDL088C MLP2P40457 1679 aa0.11□□□□□ -2.39
ASM4YDL088C FMP27Q06179 2628 aa0.09□□□□□ -2.39
ASM4YDL088C YML054C-AQ3E809 52 aa0.09□□□□□ -2.4
ASM4YDL088C YJL127C-BQ3E828 52 aa0.09□□□□□ -2.4
ASM4YDL088C Q0017Q9ZZX8 53 aa0.09□□□□□ -2.4
ASM4YDL088C CHC1P22137 1653 aaKnown RBP0.09□□□□□ -2.4
ASM4YDL088C TOR2P32600 2474 aaKnown RBP0.08□□□□□ -2.4
ASM4YDL088C MEC1P38111 2368 aa0.07□□□□□ -2.4
ASM4YDL088C YPR117WQ06116 2489 aa0.05□□□□□ -2.4
ASM4YDL088C TOM7P53507 60 aa0.05□□□□□ -2.4
ASM4YDL088C HOR7Q05827 59 aa0.05□□□□□ -2.4
ASM4YDL088C PMP3P87284 55 aa0.04□□□□□ -2.4
ASM4YDL088C GCN1P33892 2672 aaKnown RBP0.03□□□□□ -2.4
ASM4YDL088C TEL1P38110 2787 aa-0□□□□□ -2.41
ASM4YDL088C CUP1-1P0CX80 61 aa-0.02□□□□□ -2.41
ASM4YDL088C CUP1-2P0CX81 61 aa-0.02□□□□□ -2.41
ASM4YDL088C NCE101Q02820 53 aa-0.03□□□□□ -2.41
ASM4YDL088C YMR105W-AQ8TGS8 64 aa-0.03□□□□□ -2.41
ASM4YDL088C NUM1Q00402 2748 aa-0.03□□□□□ -2.41
ASM4YDL088C DYN1P36022 4092 aa-0.04□□□□□ -2.42
ASM4YDL088C YLL066W-BQ8TGJ7 56 aa-0.05□□□□□ -2.42
ASM4YDL088C CSF1Q12150 2958 aa-0.12□□□□□ -2.43
ASM4YDL088C MDN1Q12019 4910 aaKnown RBP-0.15□□□□□ -2.43
ASM4YDL088C IRA1P18963 3092 aa-0.15□□□□□ -2.43
ASM4YDL088C IRA2P19158 3079 aa-0.18□□□□□ -2.44
ASM4YDL088C TRA1P38811 3744 aa-0.19□□□□□ -2.44
ASM4YDL088C RPL39P04650 51 aa-0.21□□□□□ -2.44
ASM4YDL088C VPS13Q07878 3144 aa-0.22□□□□□ -2.44
ASM4YDL088C YIL046W-AQ3E7Z4 54 aa-0.28□□□□□ -2.45
ASM4YDL088C TOM1Q03280 3268 aa-0.31□□□□□ -2.46
ASM4YDL088C Q0297Q9ZZV8 51 aa-0.36□□□□□ -2.47
ASM4YDL088C YDR034W-BQ6Q5X2 51 aa-0.62□□□□□ -2.51
Retrieved 63 of 5,963 RNA–protein pairs in 5.5 ms