RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 OXNAD1Q96HP4 312 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 NLRP4Q96MN2 994 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ADPGKQ9BRR6 497 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 INO80BQ9C086 356 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-233ENST00000642021 GPATCH2LQ9NWQ4 482 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 NMRK1Q9NWW6 199 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 ZFATQ9P243 1243 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 WDR35Q9P2L0 1181 aa14.4□□□□□ -0.1
PHGDH-233ENST00000642021 KLHL33A6NCF5 533 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 M0QYV0 167 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SMAPO00193 183 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 FCHO1O14526 889 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 HNRNPCL1O60812 293 aaKnown RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ARIH2O95376 493 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 MRPS5P82675 430 aaKnown RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SURF1Q15526 300 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 MAP1SQ66K74 1059 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ZBTB8OSQ8IWT0 167 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 DTX3LQ8TDB6 740 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 TBX10O75333 385 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ITGB3P05106 788 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 RBL1P28749 1068 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 GABRB2P47870 512 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ZNF143P52747 638 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 BMPR2Q13873 1038 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 PRKG1Q13976 671 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 RFX8Q6ZV50 586 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SLC26A11Q86WA9 606 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 TREML1Q86YW5 311 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 PLD5Q8N7P1 536 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 CXorf38Q8TB03 319 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 RXFP2Q8WXD0 754 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 TMEM176AQ96HP8 235 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SLC13A1Q9BZW2 595 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 GPR25O00155 361 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 COPEO14579 308 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 KCNN4O15554 427 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 CILPO75339 1184 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ESRRAP11474 423 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-233ENST00000642021 CYP3A5P20815 502 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SNX30Q5VWJ9 437 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 FAM160B1Q5W0V3 765 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 VPS52Q8N1B4 723 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ZNF333Q96JL9 665 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 C20orf27Q9GZN8 174 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 CDT1Q9H211 546 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 FZD8Q9H461 694 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 ASNSD1Q9NWL6 643 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 BTBD7Q9P203 1132 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 HEY1Q9Y5J3 304 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 GJA3Q9Y6H8 435 aa14.39□□□□□ -0.11
PHGDH-233ENST00000642021 KAT6AQ92794 2004 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 IGKV6-21A0A0C4DH24 114 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 ACKR2O00590 384 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 RFPL1O75677 317 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 RARBP10826 455 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 PDGFRAP16234 1089 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 GCKP35557 465 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 SARNPP82979 210 aaKnown RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 BST1Q10588 318 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 MXD4Q14582 209 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 TEX9Q8N6V9 391 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 ARMC2Q8NEN0 867 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 HEXIM2Q96MH2 286 aaKnown RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 RNF157Q96PX1 679 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 POPDC2Q9HBU9 364 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 PLLPQ9Y342 182 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 C2CD4BA6NLJ0 364 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 CHADO15335 359 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 MAP3K13O43283 966 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 TOP3BO95985 862 aaKnown RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 HMGCRP04035 888 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 PEX19P40855 299 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 KRT72Q14CN4 511 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 MDH1BQ5I0G3 518 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 TREML2Q5T2D2 321 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 TTC39BQ5VTQ0 682 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 METTL7BQ6UX53 244 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 PQLC3Q8N755 202 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 MCUR1Q96AQ8 359 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 KLRG1Q96E93 195 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 TUBB6Q9BUF5 446 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 PNPLA8Q9NP80 782 aa14.38□□□□□ -0.11
PHGDH-233ENST00000642021 ZC3H7BQ9UGR2 993 aaKnown RBP14.38□□□□□ -0.11
PHGDH-233ENST00000642021 HMX2A2RU54 273 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CAPN9O14815 690 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 NVLO15381 856 aaKnown RBP14.37□□□□□ -0.11
PHGDH-233ENST00000642021 APRTP07741 180 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 ACADSP16219 412 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 EDNRBP24530 442 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 ERFP50548 548 aa14.37□□□□□ -0.11
PHGDH-233ENST00000642021 CLCN3P51790 818 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms