RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TCF4P15884 667 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 PDGFRAP16234 1089 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 BDNFP23560 247 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 GJC1P36383 396 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 FLT3P36888 993 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF143P52747 638 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 ADCY1Q08828 1119 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 ADIGQ0VDE8 80 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 MRPL58Q14197 206 aaKnown RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CLUL1Q15846 466 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CTXN3Q4LDR2 81 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 LRRC38Q5VT99 294 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 TRNP1Q6NT89 227 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 C4orf50Q6ZRC1 276 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 SLC26A9Q7LBE3 791 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 TMEM173Q86WV6 379 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CEP57Q86XR8 500 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 SPATA2LQ8IUW3 424 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 KATNAL2Q8IYT4 538 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 SIX6OS1Q8N1H7 587 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 BCL7CQ8WUZ0 217 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF689Q96CS4 500 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 SAMD11Q96NU1 681 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 KCNK16Q96T55 309 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 NAP1L3Q99457 506 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 C17orf80Q9BSJ5 609 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CNPY3Q9BT09 278 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 EPC1Q9H2F5 836 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CSNK1G1Q9HCP0 422 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 RBM12Q9NTZ6 932 aaKnown RBP13.73□□□□□ -0.21
PHGDH-221ENST00000641573 ASNSD1Q9NWL6 643 aa13.73□□□□□ -0.21
PHGDH-221ENST00000641573 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 OR6C75A6NL08 312 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 KRIT1O00522 736 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 RHOXF2BP0C7M4 288 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 IRS1P35568 1242 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 ALDH7A1P49419 539 aaKnown RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 TKTL1P51854 596 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 ACAP1Q15027 740 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 CCDC14Q49A88 953 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 SLC39A12Q504Y0 691 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 EFHC1Q5JVL4 640 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 ZNF280DQ6N043 979 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 TAS1R1Q7RTX1 841 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 SUGP1Q8IWZ8 645 aaKnown RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 GPR161Q8N6U8 529 aaKnown RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 PRSS33Q8NF86 280 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 B3GALT6Q96L58 329 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 RHOXF2Q9BQY4 288 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 PLVAPQ9BX97 442 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 AP1M1Q9BXS5 423 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 RC3H2Q9HBD1 1191 aaKnown RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 DMAP1Q9NPF5 467 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-221ENST00000641573 TMEM30AQ9NV96 361 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 CLDND1Q9NY35 253 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 MUTYHQ9UIF7 546 aa13.72□□□□□ -0.21
PHGDH-221ENST00000641573 HHLA1C9JL84 531 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 H7C4K7 107 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 LRCH4O75427 683 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 RNF8O76064 485 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 FBXO21O94952 628 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 KRT1P04264 644 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 SDC4P31431 198 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 NDUFV1P49821 464 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 SLC25A11Q02978 314 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 BTG3Q14201 252 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 NFE2Q16621 373 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 HADHQ16836 314 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 TCEAL5Q5H9L2 206 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 RAB41Q5JT25 222 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 ARCQ7LC44 396 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 GPRIN1Q7Z2K8 1008 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 SLC13A5Q86YT5 568 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 CMTR2Q8IYT2 770 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 RCOR2Q8IZ40 523 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 NDRG1Q92597 394 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 IGSF21Q96ID5 467 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 TTPALQ9BTX7 342 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 ULBP1Q9BZM6 244 aa13.71□□□□□ -0.21
PHGDH-221ENST00000641573 NSUN3Q9H649 340 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 DDX56Q9NY93 547 aaKnown RBP13.71□□□□□ -0.21
PHGDH-221ENST00000641573 ZDBF2Q9HCK1 2354 aa13.71□□□□□ -0.22
PHGDH-221ENST00000641573 TRIOO75962 3097 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CCDC188H7C350 402 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 GFRA3O60609 400 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 HSF2BPO75031 334 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 DAB1O75553 588 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 ZRANB2O95218 330 aaKnown RBP eCLIP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 TRUB2O95900 331 aaKnown RBP13.7□□□□□ -0.22
PHGDH-221ENST00000641573 EFEMP2O95967 443 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 KRT7P08729 469 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 CYP2F1P24903 491 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 MIPP30301 263 aa13.7□□□□□ -0.22
PHGDH-221ENST00000641573 PCK1P35558 622 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms