RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 DMAC2Q9NW81 257 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 CFAP45Q9UL16 551 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 EPG5Q9HCE0 2579 aa17.7■□□□□ 0.42
PHGDH-213ENST00000641272 PATE3B3GLJ2 98 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 KRT37O76014 449 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 CAVIN2O95810 425 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 HLA-DRAP01903 254 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 ASPAP45381 313 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
PHGDH-213ENST00000641272 AP3M2P53677 418 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 ZACNQ401N2 412 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 USP39Q53GS9 565 aaKnown RBP17.69■□□□□ 0.42
PHGDH-213ENST00000641272 CYP2U1Q7Z449 544 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 C12orf29Q8N999 325 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 CCDC26Q8TAB7 109 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 HMGB4Q8WW32 186 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 OVCA2Q8WZ82 227 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 TWNKQ96RR1 684 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 BCCIPQ9P287 314 aaKnown RBP eCLIP17.69■□□□□ 0.42
PHGDH-213ENST00000641272 RCOR1Q9UKL0 485 aa17.69■□□□□ 0.42
PHGDH-213ENST00000641272 ATXN2Q99700 1313 aaKnown RBP17.69■□□□□ 0.42
PHGDH-213ENST00000641272 PLXND1Q9Y4D7 1925 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 TCRBV21S2A2A0A5A6 115 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 E2F8A0AVK6 867 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 TRIM24O15164 1050 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 CYP26A1O43174 497 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 TLR5O60602 858 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 RPN1P04843 607 aaKnown RBP17.68■□□□□ 0.42
PHGDH-213ENST00000641272 P4HA1P13674 534 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 CLDN10P78369 228 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 MRPS21P82921 87 aaKnown RBP17.68■□□□□ 0.42
PHGDH-213ENST00000641272 ANO4Q32M45 955 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 C1orf220Q5T0J3 134 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 N4BP2L1Q5TBK1 243 aaPredicted RBP17.68■□□□□ 0.42
PHGDH-213ENST00000641272 SV2AQ7L0J3 742 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 SLC9A9Q8IVB4 645 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 FRMD1Q8N878 549 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 DDX1Q92499 740 aaKnown RBP17.68■□□□□ 0.42
PHGDH-213ENST00000641272 TBC1D14Q9P2M4 693 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 MAPK8IP1Q9UQF2 711 aa17.68■□□□□ 0.42
PHGDH-213ENST00000641272 CHD8Q9HCK8 2581 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 LNP1A1A4G5 178 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 MDM4O15151 490 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 ADAM23O75077 832 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 TBX18O95935 607 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 ASS1P00966 412 aaKnown RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 FAM200BP0CF97 657 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 CD58P19256 250 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 EIF2DP41214 584 aaKnown RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 WASP42768 502 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 KIR2DL1P43626 348 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 GAD2Q05329 585 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 C10orf76Q5T2E6 689 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 ATL3Q6DD88 541 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 PSAPL1Q6NUJ1 521 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 PGBD3Q8N328 593 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 SPATA32Q96LK8 384 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 APOBEC3GQ9HC16 384 aaKnown RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
PHGDH-213ENST00000641272 MYO18AQ92614 2054 aaKnown RBP17.67■□□□□ 0.42
PHGDH-213ENST00000641272 C4orf47A7E2U8 309 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 PDXKO00764 312 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TM4SF5O14894 197 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 CALUO43852 315 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TULP3O75386 442 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 ALDH1A2O94788 518 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 ZDHHC11BP0C7U3 371 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 NR2F2P24468 414 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 GRIA2P42262 883 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 GCLMP48507 274 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TUBP50607 506 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 ST3GAL2Q16842 350 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 SGSM1Q2NKQ1 1148 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 EOGTQ5NDL2 527 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 BTBD8Q5XKL5 378 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TMEM25Q86YD3 366 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 ETFBKMTQ8IXQ9 262 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 ZNF513Q8N8E2 541 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-213ENST00000641272 KIAA1958Q8N8K9 716 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TMC2Q8TDI7 906 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 TAS1R2Q8TE23 839 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 WHAMMQ8TF30 809 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 PIGKQ92643 395 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 SPHK2Q9NRA0 654 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 OSER1Q9NX31 292 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 IL37Q9NZH6 218 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 NUDT5Q9UKK9 219 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 HPSEQ9Y251 543 aa17.66■□□□□ 0.42
PHGDH-213ENST00000641272 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 FAM92AA1XBS5 289 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 NEDD8-MDP1E9PL57 170 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 GIPC1O14908 333 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 HOXC11O43248 304 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 KCNK5O95279 499 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 PDIA4P13667 645 aaKnown RBP17.65■□□□□ 0.42
PHGDH-213ENST00000641272 PMLP29590 882 aa17.65■□□□□ 0.42
PHGDH-213ENST00000641272 VAMP7P51809 220 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms