RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 ARID3AQ99856 593 aa26.6■■□□□ 1.85
VEGFA-232ENST00000640653 FAM186AA6NE01 2351 aa26.6■■□□□ 1.85
VEGFA-232ENST00000640653 CYP26A1O43174 497 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 OPRD1P41143 372 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 RAD23BP54727 409 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 CUL2Q13617 745 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 MORC3Q14149 939 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 SIM2Q14190 667 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-232ENST00000640653 GPR161Q8N6U8 529 aaKnown RBP26.59■■□□□ 1.85
VEGFA-232ENST00000640653 RPLP0P6Q8NHW5 317 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 NELFBQ8WX92 580 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 ACDQ96AP0 544 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 DUSP9Q99956 384 aaKnown RBP26.59■■□□□ 1.85
VEGFA-232ENST00000640653 CYLDQ9NQC7 956 aa26.59■■□□□ 1.85
VEGFA-232ENST00000640653 PTPRZ1P23471 2315 aaPredicted RBP26.59■■□□□ 1.85
VEGFA-232ENST00000640653 RIF1Q5UIP0 2472 aaKnown RBP26.58■■□□□ 1.85
VEGFA-232ENST00000640653 ATP5C1P36542 298 aaKnown RBP26.58■■□□□ 1.85
VEGFA-232ENST00000640653 PGFP49763 221 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 KIF11P52732 1056 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 SLC8A3P57103 927 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 GOLGA8FQ08AF8 430 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 GOLGA8DPQ0D2H9 430 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 GAB4Q2WGN9 574 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 ARHGAP17Q68EM7 881 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 TTI2Q6NXR4 508 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 RHBDF2Q6PJF5 856 aa26.58■■□□□ 1.85
VEGFA-232ENST00000640653 EZH1Q92800 747 aaPredicted RBP26.58■■□□□ 1.85
VEGFA-232ENST00000640653 MYH10P35580 1976 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 CCDC163A0A0D9SF12 145 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 PPP1R3GB7ZBB8 358 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 BIN1O00499 593 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 HRO43593 1189 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 IRF1P10914 325 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 ADH5P11766 374 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 BMP6P22004 513 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 TBXAS1P24557 533 aaPredicted RBP26.57■■□□□ 1.84
VEGFA-232ENST00000640653 EIF2DP41214 584 aaKnown RBP26.57■■□□□ 1.84
VEGFA-232ENST00000640653 FMO5P49326 533 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 PSEN1P49768 467 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 LAIR1Q6GTX8 287 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 CCDC186Q7Z3E2 898 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 CAMKK1Q8N5S9 505 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 CTNND2Q9UQB3 1225 aa26.57■■□□□ 1.84
VEGFA-232ENST00000640653 A0A1W2PQH9 124 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 PMM2O15305 246 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 UBE2HP62256 183 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 CETN1Q12798 172 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 SYT13Q7L8C5 426 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 TADA2BQ86TJ2 420 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 PNKPQ96T60 521 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 UBXN6Q9BZV1 441 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 OSER1Q9NX31 292 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 USP3Q9Y6I4 520 aa26.56■■□□□ 1.84
VEGFA-232ENST00000640653 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-232ENST00000640653 TBX18O95935 607 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 RARGP13631 454 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 ID4P47928 161 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 GAD2Q05329 585 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 PAK1Q13153 545 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 LPAL2Q16609 132 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 LY6G5CQ5SRR4 150 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 KLHDC10Q6PID8 442 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 CEP68Q76N32 757 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 BBS7Q8IWZ6 715 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 ANKRD52Q8NB46 1076 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 KLF16Q9BXK1 252 aaPredicted RBP26.55■■□□□ 1.84
VEGFA-232ENST00000640653 NMUR1Q9HB89 426 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 MTPAPQ9NVV4 582 aaKnown RBP eCLIP26.55■■□□□ 1.84
VEGFA-232ENST00000640653 CHMP5Q9NZZ3 219 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 NAGPAQ9UK23 515 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 LSM7Q9UK45 103 aaKnown RBP26.55■■□□□ 1.84
VEGFA-232ENST00000640653 MYO16Q9Y6X6 1858 aa26.55■■□□□ 1.84
VEGFA-232ENST00000640653 K7EQS6 105 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 GNA14O95837 355 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 RALAP11233 206 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 PXNP49023 591 aaPredicted RBP26.54■■□□□ 1.84
VEGFA-232ENST00000640653 LRMPQ12912 555 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 SRSF5Q13243 272 aaKnown RBP26.54■■□□□ 1.84
VEGFA-232ENST00000640653 DMC1Q14565 340 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 BTBD8Q5XKL5 378 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 TRIML1Q8N9V2 468 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 CDK5RAP1Q96SZ6 601 aaKnown RBP26.54■■□□□ 1.84
VEGFA-232ENST00000640653 DNMT3LQ9UJW3 386 aa26.54■■□□□ 1.84
VEGFA-232ENST00000640653 P4HA2O15460 535 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 APODP05090 189 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 HOXC13P31276 330 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 SLC6A11P48066 632 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 SEC13P55735 322 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 PREPLQ4J6C6 727 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-232ENST00000640653 SGO2Q562F6 1265 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 C10orf120Q5SQS8 335 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 HTR3DQ70Z44 454 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.53■■□□□ 1.84
VEGFA-232ENST00000640653 ZNF276Q8N554 614 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 USP33Q8TEY7 942 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 NT5C1BQ96P26 610 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 HHIPQ96QV1 700 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 SPHK2Q9NRA0 654 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 CLIC5Q9NZA1 410 aa26.53■■□□□ 1.84
VEGFA-232ENST00000640653 HESX1Q9UBX0 185 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms