RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 SULT1E1P49888 294 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ATP1A2P50993 1020 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ATP11AP98196 1134 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 TSPY1Q01534 308 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 MGAT3Q09327 533 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 TUSC3Q13454 348 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ITGA7Q13683 1181 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 DPYSL3Q14195 570 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 HIC1Q14526 733 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 NOMO1Q15155 1222 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 DPYSL2Q16555 572 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 KLHL38Q2WGJ6 581 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 DEFB115Q30KQ5 88 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ANKRD20A8PQ5CZ79 823 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 FAM26DQ5JW98 314 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SH2D3CQ8N5H7 860 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ATP11CQ8NB49 1132 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 OR2W6PQ8NHA6 318 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 BCAS4Q8TDM0 211 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 IRGQQ8WZA9 623 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 CENPIQ92674 756 aaPredicted RBP8.67□□□□□ -1.02
PNKP-231ENST00000640501 FAM149B1Q96BN6 582 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 TLCD1Q96CP7 247 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SMARCD1Q96GM5 515 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SLC9A7Q96T83 725 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SYT15Q9BQS2 421 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 TMEM121Q9BTD3 319 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 EPN3Q9H201 632 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 RNF39Q9H2S5 420 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 POPDC2Q9HBU9 364 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 CNGB3Q9NQW8 809 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 FETUBQ9UGM5 382 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SRRDQ9UH36 339 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 PADI3Q9ULW8 664 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 GABRQQ9UN88 632 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 ACTL7BQ9Y614 415 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 RAD54BQ9Y620 910 aa8.67□□□□□ -1.02
PNKP-231ENST00000640501 SF3B1O75533 1304 aaKnown RBP eCLIP8.66□□□□□ -1.02
PNKP-231ENST00000640501 EXOC1LA0A1B0GW35 172 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 BCLAF3A2AJT9 711 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 E7EVH7 732 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SPTLC1O15269 473 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 GRAP2O75791 330 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 KIAA0754O94854 1291 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 ACSL3O95573 720 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 CHRNA1P02708 482 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 COL6A1P12109 1028 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 TCF4P15884 667 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 LSP1P33241 339 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 CTCFP49711 727 aaPredicted RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 ACLYP53396 1101 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 MRPS5P82675 430 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 SOX4Q06945 474 aaPredicted RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 SKIDA1Q1XH10 827 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 C15orf59Q2T9L4 293 aaPredicted RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 PPP6R3Q5H9R7 873 aaPredicted RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 EFHC2Q5JST6 749 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SLC9A4Q6AI14 798 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 CYP4F22Q6NT55 531 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 DCLRE1AQ6PJP8 1040 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 C4orf50Q6ZRC1 276 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 ANKS1BQ7Z6G8 1248 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 PIGZQ86VD9 579 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 PALM2Q8IXS6 379 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 ARFGAP1Q8N6T3 406 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SLAIN1Q8ND83 568 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 MYCBPAPQ8TBZ2 947 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 PYROXD1Q8WU10 500 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 DYDC1Q8WWB3 177 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 ACSF2Q96CM8 615 aaPredicted RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 GAD1Q99259 594 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SELENOSQ9BQE4 189 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 ACBD6Q9BR61 282 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 HERPUD2Q9BSE4 406 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SNRNP25Q9BV90 132 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 DHX35Q9H5Z1 703 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 GOLGA2P5Q9HBQ8 144 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 PCDH18Q9HCL0 1135 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 PNPLA8Q9NP80 782 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SAYSD1Q9NPB0 183 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 NINJ2Q9NZG7 142 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 TJP2Q9UDY2 1190 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 SLC24A2Q9UI40 661 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 AP4E1Q9UPM8 1137 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 IKBKGQ9Y6K9 419 aa8.66□□□□□ -1.02
PNKP-231ENST00000640501 TDRD15B5MCY1 1934 aaKnown RBP8.66□□□□□ -1.02
PNKP-231ENST00000640501 GMNCA6NCL1 334 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 SMIM23A6NLE4 172 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 KBTBD13C9JR72 458 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 PIK3R2O00459 728 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 PPP1R12AO14974 1030 aaPredicted RBP8.65□□□□□ -1.02
PNKP-231ENST00000640501 ALOX15BO15296 676 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 CHADO15335 359 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 NCAM2O15394 837 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 AP1G2O75843 785 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 CYP11A1P05108 521 aa8.65□□□□□ -1.02
PNKP-231ENST00000640501 GSTA2P09210 222 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms