RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TIMP4Q99727 224 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 STK31Q9BXU1 1019 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 ZNF287Q9HBT7 754 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 GLOD4Q9HC38 313 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 PTGFRNQ9P2B2 879 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 AFF4Q9UHB7 1163 aaKnown RBP3.89□□□□□ -1.79
ATM-230ENST00000640388 COX11Q9Y6N1 276 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 TET3O43151 1660 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 UBR1Q8IWV7 1749 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 EHBP1L1Q8N3D4 1523 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 UNC79Q9P2D8 2635 aa3.89□□□□□ -1.79
ATM-230ENST00000640388 FMN1Q68DA7 1419 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 PZPP20742 1482 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 A1L4Q6 167 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 TRIM43BA6NCK2 446 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 LRRC3CA6NJW4 275 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 GCOM1H8Y6P7 765 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 PYCARD-AS1I3L0S3 204 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 CSF1RP07333 972 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 IL6RP08887 468 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 FAM163BP0C2L3 166 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 JUPP14923 745 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 GPD1P21695 349 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 ITPKBP27987 946 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 CYP2C18P33260 490 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 PDE6CP51160 858 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 PDE1AP54750 535 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 RPS16P62249 146 aaKnown RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 PTCHD3Q3KNS1 767 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 DPY19L2P1Q6NXN4 242 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 ZDHHC24Q6UX98 284 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 AMIGO2Q86SJ2 522 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 DGKHQ86XP1 1220 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 LRRC71Q8N4P6 559 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 AFAP1Q8N556 730 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 BPIFB1Q8TDL5 484 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 TMEM171Q8WVE6 324 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 OSCP1Q8WVF1 389 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 XAGE5Q8WWM1 108 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 NELL1Q92832 810 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 SPSB4Q96A44 273 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 TRIM43Q96BQ3 446 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 NMD3Q96D46 503 aaKnown RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 R3HDM4Q96D70 268 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 APOL5Q9BWW9 433 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 GBA2Q9HCG7 927 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 ARPP21Q9UBL0 812 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 CCNL1Q9UK58 526 aaPredicted RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 PAXBP1Q9Y5B6 917 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 GPATCH8Q9UKJ3 1502 aaKnown RBP3.88□□□□□ -1.79
ATM-230ENST00000640388 PLXNC1O60486 1568 aa3.88□□□□□ -1.79
ATM-230ENST00000640388 ABCC5O15440 1437 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ARHGAP35Q9NRY4 1499 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 TULP4Q9NRJ4 1543 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 QSOX1O00391 747 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ONECUT2O95948 504 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ENGP17813 658 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 WT1P19544 449 aaPredicted RBP3.87□□□□□ -1.79
ATM-230ENST00000640388 PCSK6P29122 969 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ATXN1P54253 815 aaKnown RBP3.87□□□□□ -1.79
ATM-230ENST00000640388 SEMA5AQ13591 1074 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 LY6KQ17RY6 165 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 INSCQ1MX18 579 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 SESTD1Q86VW0 696 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 SPARTQ8N0X7 666 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ABRAQ8N0Z2 381 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 VOPP1Q96AW1 172 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 PPP1R9BQ96SB3 815 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 XPNPEP3Q9NQH7 507 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
ATM-230ENST00000640388 DLL3Q9NYJ7 618 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 COL20A1Q9P218 1284 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ADAM21Q9UKJ8 722 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 HDAC9Q9UKV0 1011 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 SNX14Q9Y5W7 946 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 WNT6Q9Y6F9 365 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 UNC80Q8N2C7 3258 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 ABCA3Q99758 1704 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 MYO5CQ9NQX4 1742 aa3.87□□□□□ -1.79
ATM-230ENST00000640388 MYOM2P54296 1465 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 MBD3L4A6NDZ8 208 aaPredicted RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 MBD3L3A6NE82 208 aaPredicted RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 H0YIZ8 118 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 H7C4K7 107 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 MASP2O00187 686 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 RGS10O43665 173 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 RASAL1O95294 804 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 VNN1O95497 513 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 C1RP00736 705 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 HNRNPCP07910 306 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATM-230ENST00000640388 DRD4P21917 467 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 KLRC1P26715 233 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 CD38P28907 300 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 ITGA8P53708 1063 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 SOX10P56693 466 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 EEFSECP57772 596 aaKnown RBP3.86□□□□□ -1.79
ATM-230ENST00000640388 CACHD1Q5VU97 1274 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 ANKRD16Q6P6B7 361 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 KCTD20Q7Z5Y7 419 aa3.86□□□□□ -1.79
ATM-230ENST00000640388 IZUMO1Q8IYV9 350 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms