RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 WDR73Q6P4I2 378 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 Q6ZUG5 572 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SETD3Q86TU7 594 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 LRRC6Q86X45 466 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ZBED8Q8IZ13 594 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PIGKQ92643 395 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DNAJC1Q96KC8 554 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CNOT6LQ96LI5 555 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 NSMCE2Q96MF7 247 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DNAJC7Q99615 494 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TDRD9Q8NDG6 1382 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 E2F8A0AVK6 867 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 HEATR9A2RTY3 570 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 H3BUI4 141 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PGRMC1O00264 195 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 BCAR3O75815 825 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TJP3O95049 919 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ASNSP08243 561 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CNTFP26441 200 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 BCAR1P56945 870 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SSRP1Q08945 709 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CAMK2DQ13557 499 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC142Q17RM4 750 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RUNDC3AQ59EK9 446 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DTHD1Q6ZMT9 781 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ETV3LQ6ZN32 361 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TSPYL5Q86VY4 417 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 WDR49Q8IV35 697 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 KCTD13Q8WZ19 329 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 EHD4Q9H223 541 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 KCNK13Q9HB14 408 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ACTR3BQ9P1U1 418 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SPASTQ9UBP0 616 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 IPO11Q9UI26 975 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 AURKCQ9UQB9 309 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PCDHGA2Q9Y5H1 932 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SHROOM2Q13796 1616 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 A0A1B0GTQ1 180 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF839A8K0R7 811 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RNMTO43148 476 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGAP6O43182 974 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ATP2C2O75185 946 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CCNKO75909 580 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 WFS1O76024 890 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PGM3O95394 542 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 URODP06132 367 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 LAG3P18627 525 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TCN1P20061 433 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RPL10AP62906 217 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 FJX1Q86VR8 437 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TPRA1Q86W33 373 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SFR1Q86XK3 245 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC36Q8IYA8 594 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SLC38A6Q8IZM9 456 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CSGALNACT2Q8N6G5 542 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CNTD1Q8N815 330 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RBBP8NLQ8NC74 664 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SRFBP1Q8NEF9 429 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 GIPC3Q8TF64 312 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 COG1Q8WTW3 980 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 MFSD14AQ96MC6 490 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SYTL2Q9HCH5 934 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 NUDT15Q9NV35 164 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 EXD2Q9NVH0 621 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SNX7Q9UNH6 387 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DAGLAQ9Y4D2 1042 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PCDHGA11Q9Y5H2 935 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PASKQ96RG2 1323 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SMIM23A6NLE4 172 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 KCNQ3O43525 872 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SRGAP2CP0DJJ0 459 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TYRP1P17643 537 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CCNE1P24864 410 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DYRK1AQ13627 763 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TCEA2Q15560 299 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 TCHHL1Q5QJ38 904 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 GPATCH4Q5T3I0 446 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 KLHL35Q6PF15 583 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 NAT14Q8WUY8 206 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 HINFPQ9BQA5 517 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 FAM153AQ9UHL3 310 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DNAJC12Q9UKB3 198 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 LRRC42Q9Y546 428 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SCN1AP35498 2009 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ZMYM4Q5VZL5 1548 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 FMN1Q68DA7 1419 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 LRPPRCP42704 1394 aaKnown RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 KIAA0355O15063 1070 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 BCAP31P51572 246 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ARFIP1P53367 373 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PIN1Q13526 163 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 HABP2Q14520 560 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 DPYSL2Q16555 572 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PARP6Q2NL67 630 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 PLA2G4EQ3MJ16 856 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 RINT1Q6NUQ1 792 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF589Q86UQ0 364 aaPredicted RBP4.45□□□□□ -1.7
SCN3A-209ENST00000639244 SRRM1Q8IYB3 904 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms