RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 CPNE8Q86YQ8 564 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 MINDY2Q8NBR6 621 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 APBB2Q92870 758 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 ZNF641Q96N77 438 aaPredicted RBP12.46□□□□□ -0.41
CAPN3-221ENST00000638141 NDEL1Q9GZM8 345 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 LIN28AQ9H9Z2 209 aaKnown RBP12.46□□□□□ -0.41
CAPN3-221ENST00000638141 MKS1Q9NXB0 559 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 ERVK-11Q9UQG0 969 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 SCINQ9Y6U3 715 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 CLUHO75153 1309 aa12.46□□□□□ -0.41
CAPN3-221ENST00000638141 PLIN4Q96Q06 1357 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 TNFRSF10AO00220 468 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 L1CAMP32004 1257 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 INTS5Q6P9B9 1019 aaKnown RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 CRLF3Q8IUI8 442 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 SHKBP1Q8TBC3 707 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 EPS8L1Q8TE68 723 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 NLRP7Q8WX94 980 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 USP6NLQ92738 828 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 FAM111AQ96PZ2 611 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 PCDHB18PQ96TA0 734 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 GCOM2Q9BZD3 368 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 SMYD3Q9H7B4 428 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 PTBP2Q9UKA9 531 aaKnown RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 ZBTB1Q9Y2K1 713 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 HEMK1Q9Y5R4 338 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 A0A0B4J269 797 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 PNMA6FA0A0J9YX94 578 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 MEI4A8MW99 385 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 EPHB1P54762 984 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 AQP5P55064 265 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 ESRRGP62508 458 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 BFSP1Q12934 665 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 TUBB3Q13509 450 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 ACAP1Q15027 740 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 MDH1BQ5I0G3 518 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 ARID3BQ8IVW6 561 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 DLG3Q92796 817 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 TTC17Q96AE7 1141 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 FAM96AQ9H5X1 160 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 C10orf88Q9H8K7 445 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 PNPLA3Q9NST1 481 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 DRG1Q9Y295 367 aaKnown RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 MYRFQ9Y2G1 1151 aa12.45□□□□□ -0.42
CAPN3-221ENST00000638141 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
CAPN3-221ENST00000638141 E7ESA3 106 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 KPNA4O00629 521 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 CLIC2O15247 247 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 RSL1D1O76021 490 aaKnown RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 FDX1P10109 184 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 CA8P35219 290 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 RFC4P35249 363 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ALDH18A1P54886 795 aaKnown RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 BST1Q10588 318 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 C6orf183Q5T699 404 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ITPRIPL1Q6GPH6 555 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 GPR141Q7Z602 305 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 CARM1Q86X55 608 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 TMIGD2Q96BF3 282 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 C12orf43Q96C57 262 aaKnown RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 CMTM5Q96DZ9 223 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 THAP11Q96EK4 314 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 RTFDC1Q9BY42 306 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ALG13Q9NP73 1137 aaKnown RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 STK39Q9UEW8 545 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 PRPF19Q9UMS4 504 aaKnown RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 IFT52Q9Y366 437 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 PSMD12O00232 456 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 GNPATO15228 680 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ITGAXP20702 1163 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 MAPK4P31152 587 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 PCYT1AP49585 367 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 MCCD1P59942 119 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ATP6V0D1P61421 351 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 GK3PQ14409 553 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 CYTH1Q15438 398 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 EPC2Q52LR7 807 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 RALGPS1Q5JS13 557 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ACAD10Q6JQN1 1059 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 USP17L2Q6R6M4 530 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 HSPH1Q92598 858 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 GJA10Q969M2 543 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 E2F7Q96AV8 911 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 BTBD6Q96KE9 485 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 RUSC1Q9BVN2 902 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 OSBPL11Q9BXB4 747 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 UBE2TQ9NPD8 197 aaPredicted RBP12.44□□□□□ -0.42
CAPN3-221ENST00000638141 ACP6Q9NPH0 428 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 VPS28Q9UK41 221 aa12.44□□□□□ -0.42
CAPN3-221ENST00000638141 SLC8A2Q9UPR5 921 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms