RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 LRIG3Q6UXM1 1119 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 FAM43BQ6ZT52 329 aaPredicted RBP12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 STRADAQ7RTN6 431 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 VSIG1Q86XK7 387 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 ZNF280BQ86YH2 543 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 RFX6Q8HWS3 928 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 ALLCQ8N6M5 410 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 ZMIZ2Q8NF64 920 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 FAM149B1Q96BN6 582 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 PKMYT1Q99640 499 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 ADAM33Q9BZ11 813 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 TMEM30AQ9NV96 361 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 TBC1D13Q9NVG8 400 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 KANSL3Q9P2N6 904 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 ZNF148Q9UQR1 794 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 PLAAQ9Y263 795 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 FAN1Q9Y2M0 1017 aa12.8□□□□□ -0.36
CACNA1D-228ENST00000638120 CEP350Q5VT06 3117 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 ZNF487B1APH4 448 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 F8W810 466 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 APOC4-APOC2K7ER74 178 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 MYCP01106 439 aaPredicted RBP12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 KRT14P02533 472 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 APOC2P02655 101 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 CCL5P13501 91 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 TKTL1P51854 596 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 CACNA2D1P54289 1103 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 TFDP2Q14188 446 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 KRT81Q14533 505 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 RAB41Q5JT25 222 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 GSTA5Q7RTV2 222 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 MAP7D3Q8IWC1 876 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 COLGALT2Q8IYK4 626 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 DEFB106AQ8N104 65 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 DBF4BQ8NFT6 615 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 OR10T2Q8NGX3 314 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 ACTL9Q8TC94 416 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 CCHCR1Q8TD31 782 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 UBLCP1Q8WVY7 318 aaPredicted RBP12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 BEGAINQ9BUH8 593 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 CSNK1G1Q9HCP0 422 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 GPATCH2LQ9NWQ4 482 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 VPS18Q9P253 973 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 ATP8A1Q9Y2Q0 1164 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 PTPRDP23468 1912 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 NLRC5Q86WI3 1866 aa12.79□□□□□ -0.36
CACNA1D-228ENST00000638120 HHLA1C9JL84 531 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 GOLGA8KD6RF30 607 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 H0YGN5 161 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ADCY8P40145 1251 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 VPS41P49754 854 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NDUFV1P49821 464 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 CDR1P51861 262 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 DAOAP59103 153 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 YWHAZP63104 245 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 CAV1Q03135 178 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 SLC25A52Q3SY17 297 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ZC3H12AQ5D1E8 599 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 GPRIN1Q7Z2K8 1008 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 THEM5Q8N1Q8 247 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 BBOF1Q8ND07 529 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NDRG1Q92597 394 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 SEPT8Q92599 483 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 RNF157Q96PX1 679 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 SLC2A13Q96QE2 648 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 KCNK16Q96T55 309 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ZNF670Q9BS34 389 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ULBP1Q9BZM6 244 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 RNF208Q9H0X6 261 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 PCDH18Q9HCL0 1135 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 CNGB3Q9NQW8 809 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NFS1Q9Y697 457 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 PATJQ8NI35 1801 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 COL4A4P53420 1690 aaPredicted RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ENPP3O14638 875 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 PQBP1O60828 265 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NOS2P35228 1153 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 SULT1E1P49888 294 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ITGA8P53708 1063 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ATXN1P54253 815 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 PMS2P54278 862 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 YWHAHQ04917 246 aaPredicted RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 SLMAPQ14BN4 828 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 DPYSL2Q16555 572 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 CA9Q16790 459 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 ERMARDQ5T6L9 678 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 OTUD1Q5VV17 481 aaPredicted RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 BNIPLQ7Z465 357 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 APBB2Q92870 758 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NT5C3BQ969T7 300 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 FAF2Q96CS3 445 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 TMEM209Q96SK2 561 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 NPY6RQ99463 290 aa12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 MAK16Q9BXY0 300 aaKnown RBP12.78□□□□□ -0.36
CACNA1D-228ENST00000638120 RHOBTB2Q9BYZ6 727 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms