RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 FAM200BP0CF97 657 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 IL31Q6EBC2 164 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ZNF232Q9UNY5 417 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 CXXC5Q7LFL8 322 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 DLG3Q92796 817 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ALG13Q9NP73 1137 aaKnown RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ABCC2Q92887 1545 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 PRODHO43272 600 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 ANKMY2Q8IV38 441 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 OR52L1Q8NGH7 329 aa19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 GPN1Q9HCN4 374 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-257ENST00000638009 PROX1Q92786 737 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 CDK5RAP1Q96SZ6 601 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 CNOT7Q9UIV1 285 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 BAIAP2Q9UQB8 552 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 DYRK1BQ9Y463 629 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ANKRD65E5RJM6 399 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 MZF1P28698 734 aaPredicted RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 MAPK11Q15759 364 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 GLYCTKQ8IVS8 523 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 PABPC5Q96DU9 382 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ADGRE3Q9BY15 652 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ARHGAP28Q9P2N2 729 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ARHGEF33A8MVX0 844 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 RPS6KA3P51812 740 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 PROSER1Q86XN7 944 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 MCUBQ9NWR8 336 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 SMYD1Q8NB12 490 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 KIF12Q96FN5 646 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 CCDC28BQ9BUN5 200 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ASAP1Q9ULH1 1129 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 IRGMA1A4Y4 181 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 KMOO15229 486 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 HOXC9P31274 260 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 SERPINB5P36952 375 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 TSPYL6Q8N831 410 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 EEF2KO00418 725 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 ALOX5P09917 674 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 LCP1P13796 627 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 CHRM3P20309 590 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 AGO2Q9UKV8 859 aaKnown RBP19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 A0A1W2PP64 1363 aa19.91■□□□□ 0.78
CACNA1A-257ENST00000638009 COASYQ13057 564 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 VCPKMTQ9H867 229 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 DRG1Q9Y295 367 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 SH2B2O14492 632 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 PRKAR2AP13861 404 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 ITCHQ96J02 903 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 SLITRK1Q96PX8 696 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MCCC1Q96RQ3 725 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 STOX2Q9P2F5 926 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 IL12AP29459 219 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 GPR162Q16538 588 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MARK2Q7KZI7 788 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 OTUD7AQ8TE49 926 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MARK1Q9P0L2 795 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 WHRNQ9P202 907 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 ATF6P18850 670 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MTTPP55157 894 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 RIPPLY1Q0D2K3 151 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 TTC29Q8NA56 475 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MTA3Q9BTC8 594 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 FLT1P17948 1338 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 VAC14Q08AM6 782 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 RBBP4Q09028 425 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MYBPC2Q14324 1141 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 VPS72Q15906 364 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 KBTBD8Q8NFY9 601 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 ACOT12Q8WYK0 555 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 AGAP3Q96P47 875 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 CKLFQ9UBR5 152 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 CHL1O00533 1208 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 PTGER2P43116 358 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 SLC13A5Q86YT5 568 aaPredicted RBP19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 UCMAQ8WVF2 138 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 PRKAG3Q9UGI9 489 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 UTYO14607 1347 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 MYL3P08590 195 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 LRPAP1P30533 357 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 ETFBP38117 255 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 PRDM8Q9NQV8 689 aa19.9■□□□□ 0.78
CACNA1A-257ENST00000638009 SMNDC1O75940 238 aaKnown RBP eCLIP19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 LONRF1Q17RB8 773 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 OTUD5Q96G74 571 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 GANQ9H2C0 597 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 ZBTB5O15062 677 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 SCNN1DP51172 638 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 PTSQ03393 145 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 C11orf74Q86VG3 221 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 ZNF614Q8N883 585 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 RAD54LQ92698 747 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 CINPQ9BW66 212 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 APEX2Q9UBZ4 518 aa19.89■□□□□ 0.78
CACNA1A-257ENST00000638009 A0A1W2PQ72 361 aa19.89■□□□□ 0.77
CACNA1A-257ENST00000638009 AGPAT1Q99943 283 aa19.89■□□□□ 0.77
CACNA1A-257ENST00000638009 CAB39LQ9H9S4 337 aa19.89■□□□□ 0.77
CACNA1A-257ENST00000638009 SSU72P8A0A1W2PR75 194 aa19.89■□□□□ 0.77
CACNA1A-257ENST00000638009 RGS14O43566 566 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms