RNA–Protein interactions for RNA: ENST00000637788.1

ARID1A-217, Transcript of AT-rich interaction domain 1A, human

Gene ARID1A, Length 3,046 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARID1A-217	ENST00000637788	RAB20	Q9NX57	234 aa		10.8	□□□□□ -0.68
ARID1A-217	ENST00000637788	RRN3	Q9NYV6	651 aa		10.8	□□□□□ -0.68
ARID1A-217	ENST00000637788	RSL24D1	Q9UHA3	163 aa	Known RBP	10.8	□□□□□ -0.68
ARID1A-217	ENST00000637788	ANAPC5	Q9UJX4	755 aa		10.8	□□□□□ -0.68
ARID1A-217	ENST00000637788	ZBED4	O75132	1171 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	LYPLA2	O95372	231 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	DLD	P09622	509 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	KRT15	P19012	456 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CA8	P35219	290 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PIK3CA	P42336	1068 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PDAP1	Q13442	181 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	RASA2	Q15283	850 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PKN2	Q16513	984 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	SGO2	Q562F6	1265 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	MCF2L2	Q86YR7	1114 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	C4orf33	Q8N1A6	199 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	TMEM174	Q8WUU8	243 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CLPTM1L	Q96KA5	538 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	RMDN3	Q96TC7	470 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	DRC3	Q9H069	523 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	ST6GALNAC4	Q9H4F1	302 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	KMT5A	Q9NQR1	393 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CHST7	Q9NS84	486 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	WDR64	B1ANS9	1081 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	GRIN3B	O60391	1043 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CAPN15	O75808	1086 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PPARG	P37231	505 aa	Predicted RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	FDFT1	P37268	417 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	NIPA1	Q7RTP0	329 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	TTC7B	Q86TV6	843 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	MAP4K3	Q8IVH8	894 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	FBXO27	Q8NI29	283 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PSPC1	Q8WXF1	523 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CPA5	Q8WXQ8	436 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	STARD8	Q92502	1023 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CFAP57	Q96MR6	1250 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	FAM118B	Q9BPY3	351 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	HERPUD2	Q9BSE4	406 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	GBA3	Q9H227	469 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	VPS11	Q9H270	941 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	POLI	Q9UNA4	740 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	EXOC7	Q9UPT5	735 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	LOXHD1	Q8IVV2	1947 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	TTLL13P	A6NNM8	815 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	SOBP	A7XYQ1	873 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	SPECC1L-ADORA2A	F8WAN1	911 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788		H3BSA7	217 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	HNRNPDL	O14979	420 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CYP2C9	P11712	490 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PML	P29590	882 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	MAPK4	P31152	587 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	SSTR3	P32745	418 aa	Predicted RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	MAN1A1	P33908	653 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CPA2	P48052	419 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CDK9	P50750	372 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	GPC3	P51654	580 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	NOP14	P78316	857 aa	Known RBP	10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	C16orf72	Q14CZ0	275 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	ACAD10	Q6JQN1	1059 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	ELMSAN1	Q6PJG2	1045 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	RSPH3	Q86UC2	560 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	CEP170P1	Q96L14	293 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	HGH1	Q9BTY7	390 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	MANSC1	Q9H8J5	431 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	TBC1D23	Q9NUY8	699 aa		10.79	□□□□□ -0.68
ARID1A-217	ENST00000637788	PMM2	O15305	246 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ADCY6	O43306	1168 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ITM2A	O43736	263 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ATP6V1B1	P15313	513 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ATF2	P15336	505 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	HMGB2	P26583	209 aa	Known RBP	10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	TRPC1	P48995	793 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ENTPD1	P49961	510 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ERF	P50548	548 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	NUP107	P57740	925 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	EFHC1	Q5JVL4	640 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	SNRNP48	Q6IEG0	339 aa	Known RBP	10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	SREK1	Q8WXA9	508 aa	Known RBP	10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	PYDC1	Q8WXC3	89 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	JADE3	Q92613	823 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	PWWP2A	Q96N64	755 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	PDCD2L	Q9BRP1	358 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	FAM213A	Q9BRX8	229 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	TSSK1B	Q9BXA7	367 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	NMUR2	Q9GZQ4	415 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	PPCS	Q9HAB8	311 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	SLC38A10	Q9HBR0	1119 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	COQ4	Q9Y3A0	265 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788		A0A088AWK7	358 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	IL1B	P01584	269 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	RRM1	P23921	792 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	STT3A	P46977	705 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	CCT8	P50990	548 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	HIRA	P54198	1017 aa	Predicted RBP	10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	CYP24A1	Q07973	514 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	CLEC16A	Q2KHT3	1053 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	ARHGEF16	Q5VV41	709 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	C16orf87	Q6PH81	154 aa		10.78	□□□□□ -0.68
ARID1A-217	ENST00000637788	DCDC5	Q6ZRR9	648 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms