RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-222	ENST00000637533	SMG5	Q9UPR3	1016 aa	Known RBP	1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	USP22	Q9UPT9	525 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	CAMK2A	Q9UQM7	478 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	CAB39	Q9Y376	341 aa	Predicted RBP	1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	ZDHHC9	Q9Y397	364 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	MRPL11	Q9Y3B7	192 aa	Known RBP	1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	ATP6V0A2	Q9Y487	856 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	TELO2	Q9Y4R8	837 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	PCDHB7	Q9Y5E2	793 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	PCDHA3	Q9Y5H8	950 aa		1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	RSF1	Q96T23	1441 aa	Predicted RBP	1.74	□□□□□ -2.13
MECP2-222	ENST00000637533	COL15A1	P39059	1388 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3D	A0A087WVF3	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533		A0A087WWL8	130 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3I	A0A087WXS9	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3E	A0A087X179	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3K	A0A087X1G2	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TRBV2	A0A0J9YWF9	115 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CLRN2	A0PK11	232 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	FAM234B	A2RU67	622 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	FAM149A	A5PLN7	773 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3B	A6NDS4	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3F	A6NER0	549 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	OR2W5	A6NFC9	320 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	OOEP	A6NGQ2	149 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SOBP	A7XYQ1	873 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ZNF839	A8K0R7	811 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3L	B9A6J9	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533		H0Y3Z8	333 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533		H0Y858	1186 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CCDC188	H7C350	402 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SLC33A1	O00400	549 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	IPO5	O00410	1097 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PLOD2	O00469	737 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TRIM38	O00635	465 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ZSCAN9	O15535	394 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ASAP2	O43150	1006 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TXNL1	O43396	289 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	NCK2	O43639	380 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ASNA1	O43681	348 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TRIAP1	O43715	76 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TSPAN1	O60635	241 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	MSC	O60682	206 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	HSF2BP	O75031	334 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	FKTN	O75072	461 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RTN2	O75298	545 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ERN1	O75460	977 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CRCP	O75575	148 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SLC25A12	O75746	678 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PIAS2	O75928	621 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	BEST1	O76090	585 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	KIAA0754	O94854	1291 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	MFN2	O95140	757 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SIX3	O95343	332 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	LY86	O95711	162 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ONECUT2	O95948	504 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	F9	P00740	461 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	POMC	P01189	267 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	C9	P02748	559 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ALDOA	P04075	364 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	AMY2A	P04746	511 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CD1A	P06126	327 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	POLB	P06746	335 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	LPL	P06858	475 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	HNRNPA1	P09651	372 aa	Known RBP eCLIP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	C1S	P09871	688 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TBC1D3H	P0C7X1	549 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CYP2C8	P10632	490 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	HNRNPL	P14866	589 aa	Known RBP eCLIP	1.73	□□□□□ -2.13	4e-6	■□□□□ 8.2
MECP2-222	ENST00000637533	AKR1B1	P15121	316 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SELP	P16109	830 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	POR	P16435	677 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ZNF37A	P17032	561 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CD58	P19256	250 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RXRA	P19793	462 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	AMY2B	P19961	511 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	ITGAL	P20701	1170 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	MATN1	P21941	496 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	TGM1	P22735	817 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CTSS	P25774	331 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PTX3	P26022	381 aa	Predicted RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CNTF	P26441	200 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PRDX5	P30044	214 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PPIF	P30405	207 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CORO1A	P31146	461 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	HSPA4	P34932	840 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PTPN7	P35236	360 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	SLC16A2	P36021	539 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	CTSK	P43235	329 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	KCNC1	P48547	511 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	MAPKAPK2	P49137	400 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	BLK	P51451	505 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RPS6KA3	P51812	740 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	AFF3	P51826	1226 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	STAT2	P52630	851 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	PRKAG1	P54619	331 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RAD23B	P54727	409 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	NPEPPS	P55786	919 aa		1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RPS16	P62249	146 aa	Known RBP	1.73	□□□□□ -2.13
MECP2-222	ENST00000637533	RBM6	P78332	1123 aa	Known RBP	1.73	□□□□□ -2.13

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