RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 CCDC192P0DO97 292 aa20■□□□□ 0.79
CLN6-221ENST00000637494 IRF1P10914 325 aa20■□□□□ 0.79
CLN6-221ENST00000637494 ADH5P11766 374 aa20■□□□□ 0.79
CLN6-221ENST00000637494 EIF2DP41214 584 aaKnown RBP20■□□□□ 0.79
CLN6-221ENST00000637494 PSEN1P49768 467 aa20■□□□□ 0.79
CLN6-221ENST00000637494 FOXK2Q01167 660 aa20■□□□□ 0.79
CLN6-221ENST00000637494 GAD2Q05329 585 aa20■□□□□ 0.79
CLN6-221ENST00000637494 CETN1Q12798 172 aa20■□□□□ 0.79
CLN6-221ENST00000637494 CCDC40Q4G0X9 1142 aa20■□□□□ 0.79
CLN6-221ENST00000637494 PPP1R26Q5T8A7 1209 aaPredicted RBP20■□□□□ 0.79
CLN6-221ENST00000637494 NAIF1Q69YI7 327 aaPredicted RBP20■□□□□ 0.79
CLN6-221ENST00000637494 ISM2Q6H9L7 571 aa20■□□□□ 0.79
CLN6-221ENST00000637494 NUDT18Q6ZVK8 323 aa20■□□□□ 0.79
CLN6-221ENST00000637494 SYT13Q7L8C5 426 aa20■□□□□ 0.79
CLN6-221ENST00000637494 ZC3H3Q8IXZ2 948 aaKnown RBP20■□□□□ 0.79
CLN6-221ENST00000637494 WHAMMQ8TF30 809 aa20■□□□□ 0.79
CLN6-221ENST00000637494 CEP63Q96MT8 703 aa20■□□□□ 0.79
CLN6-221ENST00000637494 CIZ1Q9ULV3 898 aaPredicted RBP20■□□□□ 0.79
CLN6-221ENST00000637494 MYH10P35580 1976 aa20■□□□□ 0.79
CLN6-221ENST00000637494 TRIM49BA6NDI0 452 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 SCAMP3O14828 347 aaKnown RBP19.99■□□□□ 0.79
CLN6-221ENST00000637494 OPRD1P41143 372 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 PMS1P54277 932 aaKnown RBP19.99■□□□□ 0.79
CLN6-221ENST00000637494 LMNB2Q03252 620 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 DMC1Q14565 340 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 GAB3Q8WWW8 586 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 CDK5RAP1Q96SZ6 601 aaKnown RBP19.99■□□□□ 0.79
CLN6-221ENST00000637494 MAN1B1Q9UKM7 699 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 COQ4Q9Y3A0 265 aa19.99■□□□□ 0.79
CLN6-221ENST00000637494 RIF1Q5UIP0 2472 aaKnown RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 PRR5-ARHGAP8B1AHC4 643 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 CYP26A1O43174 497 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 LRP3O75074 770 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 RPP40O75818 363 aaKnown RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 APBB3O95704 486 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 RALAP11233 206 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 TBXAS1P24557 533 aaPredicted RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 PXNP49023 591 aaPredicted RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 SEC13P55735 322 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 ARHGAP8P85298 464 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 SRSF5Q13243 272 aaKnown RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 CBWD6Q4V339 395 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 CBWD3Q5JTY5 395 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 CBWD5Q5RIA9 395 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 LY6G5CQ5SRR4 150 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 KLHL10Q6JEL2 608 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 RHBDF2Q6PJF5 856 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 ERMP1Q7Z2K6 904 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 GPRIN1Q7Z2K8 1008 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 TATDN2Q93075 761 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 ZFRQ96KR1 1074 aaKnown RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 DUSP9Q99956 384 aaKnown RBP19.98■□□□□ 0.79
CLN6-221ENST00000637494 CYLDQ9NQC7 956 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 ARHGEF4Q9NR80 690 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 DNMT3LQ9UJW3 386 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 NAGPAQ9UK23 515 aa19.98■□□□□ 0.79
CLN6-221ENST00000637494 A0A1W2PQH9 124 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 HHLA1C9JL84 531 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 AXIN1O15169 862 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 RARGP13631 454 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 KIF11P52732 1056 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 RAD23BP54727 409 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 MRPS21P82921 87 aaKnown RBP19.97■□□□□ 0.79
CLN6-221ENST00000637494 CUL2Q13617 745 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 PUM1Q14671 1186 aaKnown RBP eCLIP19.97■□□□□ 0.79
CLN6-221ENST00000637494 ANO4Q32M45 955 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 C2orf27AQ580R0 203 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 C10orf120Q5SQS8 335 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 CCDC186Q7Z3E2 898 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 CACNA2D4Q7Z3S7 1137 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 ARHGAP18Q8N392 663 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 SLC4A11Q8NBS3 891 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 SLC35C1Q96A29 364 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 HHIPQ96QV1 700 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 UBXN6Q9BZV1 441 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 SPHK2Q9NRA0 654 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 HESX1Q9UBX0 185 aa19.97■□□□□ 0.79
CLN6-221ENST00000637494 MYO16Q9Y6X6 1858 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 K7EQS6 105 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 FOXD2O60548 495 aaPredicted RBP19.96■□□□□ 0.79
CLN6-221ENST00000637494 KAT7O95251 611 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 GRIA2P42262 883 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 PLA2G4AP47712 749 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 SPEM2Q0P670 501 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 HSF5Q4G112 596 aaPredicted RBP19.96■□□□□ 0.79
CLN6-221ENST00000637494 SGO2Q562F6 1265 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 ARHGAP17Q68EM7 881 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 KLHDC10Q6PID8 442 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 HTR3DQ70Z44 454 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 BBS7Q8IWZ6 715 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 TSTD1Q8NFU3 115 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 USP33Q8TEY7 942 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 NELFBQ8WX92 580 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 EZH1Q92800 747 aaPredicted RBP19.96■□□□□ 0.79
CLN6-221ENST00000637494 RMDN1Q96DB5 314 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 ARID3AQ99856 593 aa19.96■□□□□ 0.79
CLN6-221ENST00000637494 KLF16Q9BXK1 252 aaPredicted RBP19.96■□□□□ 0.79
CLN6-221ENST00000637494 GNA14O95837 355 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 TBX18O95935 607 aa19.95■□□□□ 0.78
CLN6-221ENST00000637494 CD19P15391 556 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms