RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 SMARCD1Q96GM5 515 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 KCNK16Q96T55 309 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 XYLT2Q9H1B5 865 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 FBXO44Q9H4M3 255 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 SPHK2Q9NRA0 654 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 TMEM30AQ9NV96 361 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 WASF3Q9UPY6 502 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 STARD13Q9Y3M8 1113 aa19.33■□□□□ 0.68
CTSD-209ENST00000637158 FAM92AA1XBS5 289 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 UPK3BL1B0FP48 263 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 UPK3BL2E5RIL1 263 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 EXOC3O60645 756 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 CUTAO60888 179 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 TULP3O75386 442 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 P4HA1P13674 534 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ENGP17813 658 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 RDXP35241 583 aaKnown RBP19.32■□□□□ 0.68
CTSD-209ENST00000637158 PTGER3P43115 390 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 SLC5A3P53794 718 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 MESP2Q0VG99 397 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 BIRC3Q13489 604 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 DUOXA1Q1HG43 343 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 BMT2Q1RMZ1 405 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ANO4Q32M45 955 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ZNF667Q5HYK9 610 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 PEAR1Q5VY43 1037 aaPredicted RBP19.32■□□□□ 0.68
CTSD-209ENST00000637158 SDE2Q6IQ49 451 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ARMCX6Q7L4S7 300 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 FAM35AQ86V20 835 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 SFTPA1Q8IWL2 248 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 NELFCDQ8IXH7 590 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ZNF516Q92618 1163 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ZFRQ96KR1 1074 aaKnown RBP19.32■□□□□ 0.68
CTSD-209ENST00000637158 TMEM74BQ9NUR3 256 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 TFIP11Q9UBB9 837 aaKnown RBP19.32■□□□□ 0.68
CTSD-209ENST00000637158 MBD1Q9UIS9 605 aaPredicted RBP19.32■□□□□ 0.68
CTSD-209ENST00000637158 PILRBQ9UKJ0 227 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 ZMIZ1Q9ULJ6 1067 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 WDFY3Q8IZQ1 3526 aa19.32■□□□□ 0.68
CTSD-209ENST00000637158 PVALEFA0A1B0GWK0 134 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 ZNF217O75362 1048 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 CLSTN1O94985 981 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 YEATS4O95619 227 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 ZDHHC11BP0C7U3 371 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 NTSR1P30989 418 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 GFPT1Q06210 699 aaPredicted RBP19.31■□□□□ 0.68
CTSD-209ENST00000637158 EHHADHQ08426 723 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 GOLGA8FQ08AF8 430 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 GOLGA8DPQ0D2H9 430 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 KNOP1Q1ED39 458 aaKnown RBP19.31■□□□□ 0.68
CTSD-209ENST00000637158 ZNF699Q32M78 642 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 HDDC3Q8N4P3 179 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 NAT16Q8N8M0 369 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 TERB1Q8NA31 727 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 DEFB124Q8NES8 71 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 SCAMP5Q8TAC9 235 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 XPO6Q96QU8 1125 aaKnown RBP19.31■□□□□ 0.68
CTSD-209ENST00000637158 SCNM1Q9BWG6 230 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 CCSER2Q9H7U1 834 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 SLC6A14Q9UN76 642 aa19.31■□□□□ 0.68
CTSD-209ENST00000637158 FAM208BQ5VWN6 2430 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 AP1G2O75843 785 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 HOXB2P14652 356 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 MAPK8P45983 427 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 RPL6Q02878 288 aaKnown RBP19.3■□□□□ 0.68
CTSD-209ENST00000637158 NCOA4Q13772 614 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 C10orf76Q5T2E6 689 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 BBS7Q8IWZ6 715 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 FRMD1Q8N878 549 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 SMYD3Q9H7B4 428 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 TLR8Q9NR97 1041 aaKnown RBP19.3■□□□□ 0.68
CTSD-209ENST00000637158 WDR35Q9P2L0 1181 aa19.3■□□□□ 0.68
CTSD-209ENST00000637158 H0Y626 953 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 TRIM16O95361 564 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 RPN1P04843 607 aaKnown RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 CFIP05156 583 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 SERPINF2P08697 491 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 ITPKAP23677 461 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 CDH8P55286 799 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 CLDN10P78369 228 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 HNRNPDQ14103 355 aaKnown RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 SGSM1Q2NKQ1 1148 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 GRAMD4Q6IC98 578 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 PAQR9Q6ZVX9 377 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 HTR3DQ70Z44 454 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 TMEM25Q86YD3 366 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 PARD3BQ8TEW8 1205 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 TAF4BQ92750 862 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 GZF1Q9H116 711 aaPredicted RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 SLC39A2Q9NP94 309 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.29■□□□□ 0.685e-12■■■■■ 28.1
CTSD-209ENST00000637158 GMIPQ9P107 970 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 LSM7Q9UK45 103 aaKnown RBP19.29■□□□□ 0.68
CTSD-209ENST00000637158 NEUROG3Q9Y4Z2 214 aa19.29■□□□□ 0.68
CTSD-209ENST00000637158 SPEGQ15772 3267 aa19.28■□□□□ 0.68
CTSD-209ENST00000637158 POLR2DO15514 142 aaKnown RBP19.28■□□□□ 0.68
CTSD-209ENST00000637158 TLR5O60602 858 aa19.28■□□□□ 0.68
CTSD-209ENST00000637158 ATP5C1P36542 298 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms