RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SLC26A9Q7LBE3 791 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 ZC3H18Q86VM9 953 aaKnown RBP12.63□□□□□ -0.39
CLN8-212ENST00000637083 PLD5Q8N7P1 536 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 KAT2BQ92831 832 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 FAF2Q96CS3 445 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 HSFY1Q96LI6 401 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 ZMAT2Q96NC0 199 aaKnown RBP12.63□□□□□ -0.39
CLN8-212ENST00000637083 OSMRQ99650 979 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 PAIP2Q9BPZ3 127 aaKnown RBP12.63□□□□□ -0.39
CLN8-212ENST00000637083 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 PCDH18Q9HCL0 1135 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 MLXIPLQ9NP71 852 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 FAM49BQ9NUQ9 324 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 GDAP2Q9NXN4 497 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 SLC12A4Q9UP95 1085 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 STARD13Q9Y3M8 1113 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 CLUHO75153 1309 aa12.63□□□□□ -0.39
CLN8-212ENST00000637083 KPNA7A9QM74 516 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 PIK3R2O00459 728 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 PIRO00625 290 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 ATP2C2O75185 946 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GRAP2O75791 330 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 RASSF9O75901 435 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 RECQL4O94761 1208 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GSTA2P09210 222 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GNAT1P11488 350 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TAC1P20366 129 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GNL1P36915 607 aaPredicted RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 NR2C2P49116 596 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TAF6P49848 677 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TMEM62Q0P6H9 643 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 MFSD10Q14728 455 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 EFHC1Q5JVL4 640 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SPRYD7Q5W111 196 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 RNF43Q68DV7 783 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 C1orf228Q6PIY5 440 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 CYP4V2Q6ZWL3 525 aaPredicted RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 BZW1Q7L1Q6 419 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 NME8Q8N427 588 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 APPL2Q8NEU8 664 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 NPLOC4Q8TAT6 608 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 LRRC8CQ8TDW0 803 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 PAFAH2Q99487 392 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 DHRS4Q9BTZ2 278 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SNRNP25Q9BV90 132 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 EIF2AQ9BY44 585 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 SLC40A1Q9NP59 571 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 KLC4Q9NSK0 619 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TUBGCP4Q9UGJ1 667 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TM9SF1O15321 606 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 KCNN4O15554 427 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 PAPSS1O43252 624 aaPredicted RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 HUS1O60921 280 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SPAG7O75391 227 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 ZNF189O75820 626 aaPredicted RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 TMEM63AO94886 807 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 KCNE1P15382 129 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SSTR1P30872 391 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 CCDC15Q0P6D6 951 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 KCNJ11Q14654 390 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 PDK4Q16654 411 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SOWAHAQ2M3V2 549 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SH3PXD2AQ5TCZ1 1133 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 LGSNQ5TDP6 509 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 TRNP1Q6NT89 227 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 SCUBE3Q8IX30 993 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 C7orf31Q8N865 590 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 LRRC39Q96DD0 335 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 C10orf88Q9H8K7 445 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GNEQ9Y223 722 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 PIN4Q9Y237 131 aaKnown RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 Q9Y3F1 56 aa12.62□□□□□ -0.39
CLN8-212ENST00000637083 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.62□□□□□ -0.39
CLN8-212ENST00000637083 KAT6AQ92794 2004 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 ADCY6O43306 1168 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 TYROBPO43914 113 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 ITGBL1O95965 494 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 PSMC4P43686 418 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 PSEN2P49810 448 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 WDR4P57081 412 aaKnown RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 ADCY1Q08828 1119 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 DPYSL2Q16555 572 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 XKR4Q5GH76 650 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 NPNTQ6UXI9 565 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 TLK2Q86UE8 772 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 CENPIQ92674 756 aaPredicted RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 APBB2Q92870 758 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 PIWIL1Q96J94 861 aaKnown RBP12.61□□□□□ -0.39
CLN8-212ENST00000637083 FERMT1Q9BQL6 677 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 AP5M1Q9H0R1 490 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 RXFP1Q9HBX9 757 aa12.61□□□□□ -0.39
CLN8-212ENST00000637083 PNPLA8Q9NP80 782 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms