RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C2orf16Q68DN1 1984 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 ANAPC1Q9H1A4 1944 aa7.09□□□□□ -1.27
UPF3B-205ENST00000636792 EPOPA6NHQ4 379 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 HIDE1A8MVS5 230 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 RBAK-RBAKDNI3L0D1 243 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 M0QYV0 167 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 SOX1O00570 391 aaPredicted RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PRRG1O14668 218 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ARHGAP6O43182 974 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CLASP2O75122 1294 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 AP1G2O75843 785 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 MICAL2O94851 1124 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 LCA5LO95447 670 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 LRG1P02750 347 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CALB1P05937 261 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 C8AP07357 584 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 GLI1P08151 1106 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 IGFBP6P24592 240 aaPredicted RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 BRD2P25440 801 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CA8P35219 290 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 GPD2P43304 727 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 NSFP46459 744 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 GABRB2P47870 512 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ALDH1A3P47895 512 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 TUBP50607 506 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 EPHB3P54753 998 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 FMO1Q01740 532 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 APBA1Q02410 837 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ITIH3Q06033 890 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 GOLGA7BQ2TAP0 167 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PABPC1LQ4VXU2 614 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 RAB41Q5JT25 222 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PPM1LQ5SGD2 360 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 WDR59Q6PJI9 974 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 RSPO2Q6UXX9 243 aaPredicted RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CLEC20AQ6ZU45 233 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 TOGARAM2Q6ZUX3 1019 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ARCQ7LC44 396 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 NOP9Q86U38 636 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 LRRTM3Q86VH5 581 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 TTC30AQ86WT1 665 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PHF13Q86YI8 300 aaPredicted RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ARHGAP18Q8N392 663 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 TMEM130Q8N3G9 435 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ZNF276Q8N554 614 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 KREMEN2Q8NCW0 462 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 SLC35F5Q8WV83 523 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 UBE2Q2Q8WVN8 375 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PSMG2Q969U7 264 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PABPC5Q96DU9 382 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 B3GALT6Q96L58 329 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 MYRFLQ96LU7 910 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC42Q96M95 316 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PPP1R9BQ96SB3 815 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CDK5RAP1Q96SZ6 601 aaKnown RBP7.08□□□□□ -1.28
UPF3B-205ENST00000636792 AGPAT1Q99943 283 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 MED10Q9BTT4 135 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 B3GNT5Q9BYG0 378 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PRDM12Q9H4Q4 367 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 HAUS4Q9H6D7 363 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 TLE6Q9H808 572 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CYP4F11Q9HBI6 524 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 CNGB3Q9NQW8 809 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 MAN1C1Q9NR34 630 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 FAM49BQ9NUQ9 324 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 ASNSD1Q9NWL6 643 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 IL37Q9NZH6 218 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 INTUQ9ULD6 942 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 DYRK1BQ9Y463 629 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 HCFC2Q9Y5Z7 792 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 MTCH2Q9Y6C9 303 aa7.08□□□□□ -1.28
UPF3B-205ENST00000636792 PRRC2BQ5JSZ5 2229 aaKnown RBP7.07□□□□□ -1.28
UPF3B-205ENST00000636792 EIF3CLB5ME19 914 aaKnown RBP7.07□□□□□ -1.28
UPF3B-205ENST00000636792 ZNF197O14709 1029 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 OIP5O43482 229 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 ATP2C2O75185 946 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 RTN2O75298 545 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 MMEP08473 750 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 UNGP13051 313 aaPredicted RBP7.07□□□□□ -1.28
UPF3B-205ENST00000636792 CCDC130P13994 396 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 DESP17661 470 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 TNFAIP3P21580 790 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 MMP8P22894 467 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 DDX6P26196 483 aaKnown RBP eCLIP7.07□□□□□ -1.28
UPF3B-205ENST00000636792 ADORA2BP29275 332 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 CDC25CP30307 473 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 GPC1P35052 558 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 NRIP1P48552 1158 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 EPHA5P54756 1037 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 ADKP55263 362 aaKnown RBP7.07□□□□□ -1.28
UPF3B-205ENST00000636792 PDE4CQ08493 712 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 HYAL1Q12794 435 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 DUSP4Q13115 394 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 MTA1Q13330 715 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 PDCLQ13371 301 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 GRIN2CQ14957 1233 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 NR6A1Q15406 480 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 CLEC16AQ2KHT3 1053 aa7.07□□□□□ -1.28
UPF3B-205ENST00000636792 ASTE1Q2TB18 679 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms