RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IL17RAQ96F46 866 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 KCNS3Q9BQ31 491 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 TMCC3Q9ULS5 477 aa18.4■□□□□ 0.54
CACNA1A-227ENST00000636549 H7C1W4 665 aa18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 CTCFP49711 727 aaPredicted RBP18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 EMILIN2Q9BXX0 1053 aa18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 RIC8BQ9NVN3 520 aa18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 RBM7Q9Y580 266 aaKnown RBP18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 PFASO15067 1338 aa18.39■□□□□ 0.54
CACNA1A-227ENST00000636549 ERN1O75460 977 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 IL18RAPO95256 599 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CYP2C8P10632 490 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 BYSLQ13895 437 aaKnown RBP18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 PROM2Q8N271 834 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 USP13Q92995 863 aaPredicted RBP18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 C19orf81C9J6K1 198 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CES3Q6UWW8 571 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 TRAPPC5Q8IUR0 188 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 DSELQ8IZU8 1212 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 PXMP2Q9NR77 195 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 GULP1Q9UBP9 304 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 USP6P35125 1406 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 DGAT1O75907 488 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 AMHP03971 560 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 ITGA8P53708 1063 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 POU6F1Q14863 301 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 TRADDQ15628 312 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 DENND6AQ8IWF6 608 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 ZNF333Q96JL9 665 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CORO1BQ9BR76 489 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 KDM5CP41229 1560 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 ADAMTS12P58397 1594 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CTNNB1P35222 781 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 FMO5P49326 533 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CYP24A1Q07973 514 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 GRIK3Q13003 919 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 TTLL9Q3SXZ7 439 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 NRSN1Q8IZ57 195 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 CCDC185Q8N715 623 aa18.39■□□□□ 0.53
CACNA1A-227ENST00000636549 HBP1O60381 514 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PIGHQ14442 188 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 DNAJC14Q6Y2X3 702 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM131BQ86XD5 332 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PCYOX1LQ8NBM8 494 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC4A5Q9BY07 1137 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 FAM96AQ9H5X1 160 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 RPN2P04844 631 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 THP07101 528 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 INSCQ1MX18 579 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 GMCL1Q96IK5 515 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 BAIAP3O94812 1187 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 AP3M2P53677 418 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC13A5Q86YT5 568 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PARP9Q8IXQ6 854 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 GLIS2Q9BZE0 524 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PLEKHG1Q9ULL1 1385 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 DEAF1O75398 565 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 SPRP35270 261 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 SEC13P55735 322 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 EFHC1Q5JVL4 640 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 GPR152Q8TDT2 470 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 CAMKK2Q96RR4 588 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 CHP1Q99653 195 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 BPIFA1Q9NP55 256 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 DDX43Q9NXZ2 648 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 GALCP54803 685 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 ORC2Q13416 577 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 NAA30Q147X3 362 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 SLC39A12Q504Y0 691 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 RNF19BQ6ZMZ0 732 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 ATG4AQ8WYN0 398 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 ZCCHC17Q9NP64 241 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 AVENQ9NQS1 362 aaPredicted RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 DNAJC16Q9Y2G8 782 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 MAGEB2O15479 319 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 COMTP21964 271 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 STXBP1P61764 594 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
CACNA1A-227ENST00000636549 GSAPA4D1B5 854 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 MTA2O94776 668 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SGPL1O95470 568 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 LIFRP42702 1097 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 RASAL3Q86YV0 1011 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SH3GL2Q99962 352 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 MAT2BQ9NZL9 334 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 EXTL3O43909 919 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SPATA21Q7Z572 469 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 ALBP02768 609 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 NFYCQ13952 458 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 C3orf67Q6ZVT6 689 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 SEPHS2Q99611 448 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 ACADSBP45954 432 aa18.37■□□□□ 0.53
CACNA1A-227ENST00000636549 THOP1P52888 689 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms