RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	FRMD4B	Q9Y2L6	1034 aa		7.76	□□□□□ -1.17
CACNA1A-222	ENST00000636022	NUP205	Q92621	2012 aa		7.76	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZFHX4	Q86UP3	3567 aa		7.76	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ATP8B3	O60423	1300 aa		7.76	□□□□□ -1.17
CACNA1A-222	ENST00000636022	LAMA5	O15230	3695 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DSP	P15924	2871 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PI4KA	P42356	2102 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SPEG	Q15772	3267 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HHLA1	C9JL84	531 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SLC9A3R1	O14745	358 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SCAMP3	O14828	347 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	AXIN1	O15169	862 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GDF9	O60383	454 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GREM1	O60565	184 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZNF202	O95125	648 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	EPN2	O95208	641 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KIF20A	O95235	890 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TRIM49	P0CI25	452 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TRIM49C	P0CI26	452 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MBL2	P11226	248 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC130	P13994	396 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	EIF2D	P41214	584 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GCLM	P48507	274 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TUB	P50607	506 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	VAMP7	P51809	220 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	IFRD2	Q12894	506 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	C2orf27A	Q580R0	203 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PLA2G2C	Q5R387	149 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HECTD3	Q5T447	861 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	INTS8	Q75QN2	995 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	C12orf40	Q86WS4	652 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DDX42	Q86XP3	938 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SFTPA1	Q8IWL2	248 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PHTF2	Q8N3S3	785 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC26	Q8TAB7	109 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TAS1R2	Q8TE23	839 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	WHAMM	Q8TF30	809 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	WBP2	Q969T9	261 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ACD	Q96AP0	544 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HNRNPAB	Q99729	332 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	RTKN	Q9BST9	563 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MED10	Q9BTT4	135 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DUSP15	Q9H1R2	295 aa	Predicted RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KRT82	Q9NSB4	513 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GMIP	Q9P107	970 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CDV3	Q9UKY7	258 aa	Known RBP	7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MAPK8IP1	Q9UQF2	711 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	IGF2R	P11717	2491 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	THADA	Q6YHU6	1953 aa		7.75	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CACNA1E	Q15878	2313 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DCDC2B	A2VCK2	349 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SLC30A4	O14863	429 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DCLK1	O15075	740 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FOXD2	O60548	495 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KAT7	O95251	611 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	APBB3	O95704	486 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TBX18	O95935	607 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ADH1C	P00326	375 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ZNF806	P0C7X5	589 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CCDC192	P0DO97	292 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ADH5	P11766	374 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	RPL13	P26373	211 aa	Known RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PIK3CA	P42336	1068 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KIR2DL1	P43626	348 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SEC13	P55735	322 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MAP3K7CL	P57077	242 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MRPS21	P82921	87 aa	Known RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ADAM9	Q13443	819 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	EDRF1	Q3B7T1	1238 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PLK5	Q496M5	336 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	LY6G5C	Q5SRR4	150 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CLEC20A	Q6ZU45	233 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GPRIN1	Q7Z2K8	1008 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	RASSF3	Q86WH2	238 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ETFBKMT	Q8IXQ9	262 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FAM186B	Q8IYM0	893 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FMR1NB	Q8N0W7	255 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	NETO1	Q8TDF5	533 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	OTUB2	Q96DC9	234 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PNKP	Q96T60	521 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	KLF16	Q9BXK1	252 aa	Predicted RBP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	NIF3L1	Q9GZT8	377 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ARRDC1-AS1	Q9H2J1	176 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FBXO44	Q9H4M3	255 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	CYP3A43	Q9HB55	503 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	GDPD2	Q9HCC8	539 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TMEM8A	Q9HCN3	771 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	FAM49B	Q9NUQ9	324 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	OSER1	Q9NX31	292 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	TBC1D14	Q9P2M4	693 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	MMP17	Q9ULZ9	603 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	SCML2	Q9UQR0	700 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PCDHGA5	Q9Y5G8	931 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ATP6V1D	Q9Y5K8	247 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	DMXL2	Q8TDJ6	3036 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	PLXND1	Q9Y4D7	1925 aa		7.74	□□□□□ -1.17
CACNA1A-222	ENST00000636022	ASCC3	Q8N3C0	2202 aa	Known RBP	7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms