RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 TMEM25Q86YD3 366 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 KCTD17Q8N5Z5 321 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 PLIN2Q99541 437 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 GPR174Q9BXC1 333 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 SPHK2Q9NRA0 654 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 EHD2Q9NZN4 543 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 ODF2LQ9ULJ1 636 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 RAD54BQ9Y620 910 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 STYXL1Q9Y6J8 313 aa19.36■□□□□ 0.69
CLN6-212ENST00000636020 IL18RAPO95256 599 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 ITGB3P05106 788 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 NOP14P78316 857 aaKnown RBP19.35■□□□□ 0.69
CLN6-212ENST00000636020 MYO1EQ12965 1108 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 SLFN12LQ6IEE8 588 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 GPR155Q7Z3F1 870 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 LURAP1LQ8IV03 231 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 ADGRF2Q8IZF7 708 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 MYCT1Q8N699 235 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 TOP6BLQ8N6T0 577 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 LRRC52Q8N7C0 313 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 C1orf127Q8N9H9 656 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 C1orf216Q8TAB5 229 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 CXorf38Q8TB03 319 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 MYLPFQ96A32 169 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 NXPE2Q96DL1 559 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 ZFRQ96KR1 1074 aaKnown RBP19.35■□□□□ 0.69
CLN6-212ENST00000636020 REEP2Q9BRK0 252 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 NOL7Q9UMY1 257 aaKnown RBP19.35■□□□□ 0.69
CLN6-212ENST00000636020 PCDHB6Q9Y5E3 794 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 SNX9Q9Y5X1 595 aa19.35■□□□□ 0.69
CLN6-212ENST00000636020 RRP8O43159 456 aaKnown RBP19.34■□□□□ 0.69
CLN6-212ENST00000636020 ARHGAP6O43182 974 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 ANXA13P27216 316 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 PRPHP41219 470 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 TOB1P50616 345 aaPredicted RBP19.34■□□□□ 0.69
CLN6-212ENST00000636020 ZNF131P52739 623 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 WNT7BP56706 349 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 GTF2BQ00403 316 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 TAF10Q12962 218 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 SOWAHAQ2M3V2 549 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 ANO4Q32M45 955 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 CCDC157Q569K6 752 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 DCAF12L1Q5VU92 463 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 GRAMD4Q6IC98 578 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 DTHD1Q6ZMT9 781 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 C8orf76Q96K31 380 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 FIZ1Q96SL8 496 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 DUSP9Q99956 384 aaKnown RBP19.34■□□□□ 0.69
CLN6-212ENST00000636020 SYT15Q9BQS2 421 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 CLMPQ9H6B4 373 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 CRTAC1Q9NQ79 661 aa19.34■□□□□ 0.69
CLN6-212ENST00000636020 USP36Q9P275 1121 aaKnown RBP19.34■□□□□ 0.69
CLN6-212ENST00000636020 A0A1B0GVT2 93 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 METTL12A8MUP2 240 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 PRRT4C9JH25 899 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 GFRA2O00451 464 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 LAD1O00515 517 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 TRAK2O60296 914 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 PLCG1P19174 1290 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 LMO2P25791 158 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 PSMC1P62191 440 aaKnown RBP19.33■□□□□ 0.68
CLN6-212ENST00000636020 TFAMQ00059 246 aaKnown RBP19.33■□□□□ 0.68
CLN6-212ENST00000636020 SEMG2Q02383 582 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 BBS7Q8IWZ6 715 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 ITM2CQ9NQX7 267 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 EIF2B4Q9UI10 523 aaKnown RBP19.33■□□□□ 0.68
CLN6-212ENST00000636020 CDH9Q9ULB4 789 aa19.33■□□□□ 0.68
CLN6-212ENST00000636020 COL12A1Q99715 3063 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 KCNJ18B7U540 433 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 WASH3PC4AMC7 463 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 TRIM66O15016 1216 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 FAM13AO94988 1023 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 GRK6P43250 576 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 ST3GAL1Q11201 340 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 LIMS2Q7Z4I7 341 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 CSGALNACT2Q8N6G5 542 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 C8orf48Q96LL4 319 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 PARVGQ9HBI0 331 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 DNAJC17Q9NVM6 304 aaKnown RBP19.32■□□□□ 0.68
CLN6-212ENST00000636020 GMIPQ9P107 970 aa19.32■□□□□ 0.68
CLN6-212ENST00000636020 F8VP50 259 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 COCHO43405 550 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 ABCD1P33897 745 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 CSNK1EP49674 416 aaKnown RBP19.31■□□□□ 0.68
CLN6-212ENST00000636020 CYP27A1Q02318 531 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 MAPRE1Q15691 268 aaKnown RBP19.31■□□□□ 0.68
CLN6-212ENST00000636020 C6orf118Q5T5N4 469 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 TDRD10Q5VZ19 366 aaKnown RBP19.31■□□□□ 0.68
CLN6-212ENST00000636020 SNIP1Q8TAD8 396 aaKnown RBP19.31■□□□□ 0.68
CLN6-212ENST00000636020 SCFD1Q8WVM8 642 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 KBTBD7Q8WVZ9 684 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 WBP2Q969T9 261 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 SLITRK1Q96PX8 696 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 SH3BP1Q9Y3L3 701 aa19.31■□□□□ 0.68
CLN6-212ENST00000636020 CACNG3O60359 315 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 JUPP14923 745 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 ADSSP30520 456 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 GNL2Q13823 731 aaKnown RBP19.3■□□□□ 0.68
CLN6-212ENST00000636020 KIF19Q2TAC6 998 aa19.3■□□□□ 0.68
CLN6-212ENST00000636020 FUT11Q495W5 492 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms