RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZBED1O96006 694 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CSH1P0DML2 217 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CSH2P0DML3 217 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 YWHAQP27348 245 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 GABRB2P47870 512 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 RPL34P49207 117 aaKnown RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 GALCP54803 685 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 PTP4A2Q12974 167 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 C10orf76Q5T2E6 689 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 FAM183BPQ6ZVS7 135 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 DNAJB7Q7Z6W7 309 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 C12orf76Q8N812 135 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 NDRG1Q92597 394 aaKnown RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ZNF512Q96ME7 567 aaPredicted RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 FBXO44Q9H4M3 255 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 DZANK1Q9NVP4 752 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 RAB21Q9UL25 225 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 REXO2Q9Y3B8 237 aaKnown RBP15.17■□□□□ 0.02
LINC00339-208ENST00000634934 ASB3Q9Y575 518 aa15.17■□□□□ 0.02
LINC00339-208ENST00000634934 CCDC195A0A1B0GUA6 201 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 ANKRD62A6NC57 917 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 PAPSS1O43252 624 aaPredicted RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 XYLBO75191 536 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 FBXO21O94952 628 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 GLP2RO95838 553 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 HNRNPA1P09651 372 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 RRM1P23921 792 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 TFF2Q03403 129 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 KCNC3Q14003 757 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 WHAMMP3Q1A5X7 153 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 KIAA1328Q86T90 577 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 XYLT1Q86Y38 959 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 CLEC4CQ8WTT0 213 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 CTNNBL1Q8WYA6 563 aaPredicted RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 FBXO32Q969P5 355 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 PSMG2Q969U7 264 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 VCPIP1Q96JH7 1222 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 THAP2Q9H0W7 228 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 CNGB3Q9NQW8 809 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 ZDHHC7Q9NXF8 308 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 EHD2Q9NZN4 543 aa15.16■□□□□ 0.02
LINC00339-208ENST00000634934 CNOT8Q9UFF9 292 aaKnown RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 V9GYY5 206 aaPredicted RBP15.16■□□□□ 0.02
LINC00339-208ENST00000634934 MYBL1P10243 752 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 HMGA1P17096 107 aaKnown RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 HOXA9P31269 272 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 GPC5P78333 572 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 MRPS5P82675 430 aaKnown RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 DLX2Q07687 328 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 TAF10Q12962 218 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 ADAM15Q13444 863 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 ZNF268Q14587 947 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 CC2D1AQ6P1N0 951 aaPredicted RBP15.15■□□□□ 0.02
LINC00339-208ENST00000634934 DNAJC24Q6P3W2 148 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 TMC5Q6UXY8 1006 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 LRRN4CLQ8ND94 238 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 CORO1BQ9BR76 489 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 APOL5Q9BWW9 433 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 PRKD2Q9BZL6 878 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 SFXN1Q9H9B4 322 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 PIDD1Q9HB75 910 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 COMMD8Q9NX08 183 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 CLDND1Q9NY35 253 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 WDR35Q9P2L0 1181 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 TFR2Q9UP52 801 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 SCML2Q9UQR0 700 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 USP3Q9Y6I4 520 aa15.15■□□□□ 0.02
LINC00339-208ENST00000634934 SART1O43290 800 aaKnown RBP15.14■□□□□ 0.01
LINC00339-208ENST00000634934 TBX10O75333 385 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 LTBRP36941 435 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 DAOAP59103 153 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 SLC6A3Q01959 620 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 TAF5Q15542 800 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 RARS2Q5T160 578 aaKnown RBP15.14■□□□□ 0.01
LINC00339-208ENST00000634934 PM20D1Q6GTS8 502 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 ANKRD54Q6NXT1 300 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 OLFML1Q6UWY5 402 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 TMEM184AQ6ZMB5 413 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 ZDHHC17Q8IUH5 632 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 HS6ST3Q8IZP7 471 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 FAM149B1Q96BN6 582 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 ARHGEF26Q96DR7 871 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 PIWIL1Q96J94 861 aaKnown RBP15.14■□□□□ 0.01
LINC00339-208ENST00000634934 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 TTLL2Q9BWV7 592 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 ARFGAP3Q9NP61 516 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 IL37Q9NZH6 218 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 GMIPQ9P107 970 aa15.14■□□□□ 0.01
LINC00339-208ENST00000634934 H3BQ06 376 aaPredicted RBP15.13■□□□□ 0.01
LINC00339-208ENST00000634934 NCK2O43639 380 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 GRAP2O75791 330 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 GJB6O95452 261 aa15.13■□□□□ 0.01
LINC00339-208ENST00000634934 ABL1P00519 1130 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms