RNA–Protein interactions for RNA: ENST00000628569.1

RAB5B-211, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB5B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-211ENST00000628569 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 TTC13Q8NBP0 860 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 ATL2Q8NHH9 583 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 DIS3LQ8TF46 1054 aaKnown RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 C1orf54Q8WWF1 131 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 NKD2Q969F2 451 aaPredicted RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 FUBP3Q96I24 572 aaKnown RBP eCLIP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 TRIM51Q9BSJ1 452 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 HEMGNQ9BXL5 484 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 OXCT2Q9BYC2 517 aaPredicted RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 PPP1R12CQ9BZL4 782 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 C11orf49Q9H6J7 331 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 DMAP1Q9NPF5 467 aaPredicted RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 TMLHEQ9NVH6 421 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 KLHL11Q9NVR0 708 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 OGFRQ9NZT2 677 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 ADAM28Q9UKQ2 775 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 DRG1Q9Y295 367 aaKnown RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 R3HDM2Q9Y2K5 976 aaKnown RBP13.54□□□□□ -0.24
RAB5B-211ENST00000628569 NEU2Q9Y3R4 380 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 USP3Q9Y6I4 520 aa13.54□□□□□ -0.24
RAB5B-211ENST00000628569 PLXNA3P51805 1871 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 DAPK3O43293 454 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 TADA2AO75478 443 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ALDH2P05091 517 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 KRT10P13645 584 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 SLC11A1P49279 550 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 LMNB2Q03252 620 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
RAB5B-211ENST00000628569 TRADDQ15628 312 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 KCNT1Q5JUK3 1230 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 OTUD1Q5VV17 481 aaPredicted RBP13.53□□□□□ -0.24
RAB5B-211ENST00000628569 BHLHA9Q7RTU4 235 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
RAB5B-211ENST00000628569 DEFB106AQ8N104 65 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 SLC35B2Q8TB61 432 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 FAF2Q96CS3 445 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 PGAP3Q96FM1 320 aaPredicted RBP13.53□□□□□ -0.24
RAB5B-211ENST00000628569 KCNK16Q96T55 309 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 NPY6RQ99463 290 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ADAM33Q9BZ11 813 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ULBP1Q9BZM6 244 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 NGRNQ9NPE2 291 aaKnown RBP13.53□□□□□ -0.24
RAB5B-211ENST00000628569 ZDHHC18Q9NUE0 388 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 RRN3Q9NYV6 651 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 PCSK1NQ9UHG2 260 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 STAP1Q9ULZ2 295 aa13.53□□□□□ -0.24
RAB5B-211ENST00000628569 BRCA2P51587 3418 aa13.52□□□□□ -0.24
RAB5B-211ENST00000628569 OR6C75A6NL08 312 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 KIAA0355O15063 1070 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 LIASO43766 372 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 GALTP07902 379 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 HSPA9P38646 679 aaKnown RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 KCNJ1P48048 391 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 NDUFV1P49821 464 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 GATMP50440 423 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ATP11AP98196 1134 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 IKBKEQ14164 716 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 DPYSL3Q14195 570 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 DPYSL2Q16555 572 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 CDO1Q16878 200 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 SMTNL2Q2TAL5 461 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 RAB6CQ53S08 254 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ERMARDQ5T6L9 678 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 VSTM1Q6UX27 236 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 SND1Q7KZF4 910 aaKnown RBP eCLIP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 MAP7D3Q8IWC1 876 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 KCTD6Q8NC69 237 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 IFT81Q8WYA0 676 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ATG4AQ8WYN0 398 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ACSF2Q96CM8 615 aaPredicted RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 TMEM209Q96SK2 561 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 HINFPQ9BQA5 517 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ZNF670Q9BS34 389 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 TRIM62Q9BVG3 475 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 RAB6CQ9H0N0 254 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 PRDM16Q9HAZ2 1276 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 POPDC2Q9HBU9 364 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 TMEM39AQ9NV64 488 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 GRHL1Q9NZI5 618 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 WHRNQ9P202 907 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 HPCAL4Q9UM19 191 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 ATP11BQ9Y2G3 1177 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 FAN1Q9Y2M0 1017 aa13.52□□□□□ -0.25
RAB5B-211ENST00000628569 PRG3Q9Y2Y8 225 aaPredicted RBP13.52□□□□□ -0.25
RAB5B-211ENST00000628569 SF3B1O75533 1304 aaKnown RBP eCLIP13.52□□□□□ -0.252e-7■■■■■ 66.8
RAB5B-211ENST00000628569 ABHD14A-ACY1A0A1B0GW23 586 aa13.51□□□□□ -0.25
RAB5B-211ENST00000628569 APOC4-APOC2K7ER74 178 aa13.51□□□□□ -0.25
RAB5B-211ENST00000628569 TNFRSF10BO14763 440 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms