RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 RALAP11233 206 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 RARGP13631 454 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 PGFP49763 221 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 TKTL1P51854 596 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 MYL5Q02045 173 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 ARHGAP44Q17R89 818 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 TRIM68Q6AZZ1 485 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 PM20D1Q6GTS8 502 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 GJB7Q6PEY0 223 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 TADA2BQ86TJ2 420 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 CCDC105Q8IYK2 499 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 ANKRD20A12PQ8NF67 263 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 RIN3Q8TB24 985 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 SLC35F5Q8WV83 523 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 ATP2A3Q93084 1043 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 CLDN23Q96B33 292 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 CDK5RAP1Q96SZ6 601 aaKnown RBP17.62■□□□□ 0.41
UBE3D-208ENST00000626828 LINC00597Q9H2U6 94 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 HPS4Q9NQG7 708 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 SMPD4Q9NXE4 827 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 CLIC5Q9NZA1 410 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 DLGAP2Q9P1A6 1054 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 TBC1D14Q9P2M4 693 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 NAGPAQ9UK23 515 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 DNAJC12Q9UKB3 198 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.62■□□□□ 0.41
UBE3D-208ENST00000626828 MIA3Q5JRA6 1907 aa17.62■□□□□ 0.41
UBE3D-208ENST00000626828 KMT2EQ8IZD2 1858 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 A0A1W2PQH9 124 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 E2F8A0AVK6 867 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 CYP26A1O43174 497 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 MED7O43513 233 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 ZBED1O96006 694 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 CDK11BP21127 795 aaKnown RBP17.61■□□□□ 0.41
UBE3D-208ENST00000626828 BRD2P25440 801 aaKnown RBP17.61■□□□□ 0.41
UBE3D-208ENST00000626828 TARSP26639 723 aaKnown RBP17.61■□□□□ 0.41
UBE3D-208ENST00000626828 CTHP32929 405 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 USP8P40818 1118 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 PLA2G4AP47712 749 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 PTPN5P54829 565 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 KCNMA1Q12791 1236 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 KLHL40Q2TBA0 621 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 KLHDC10Q6PID8 442 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 SCD5Q86SK9 330 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 ADGRG2Q8IZP9 1017 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 CPA6Q8N4T0 437 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 ZNF606Q8WXB4 792 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 HSFY1Q96LI6 401 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 ZSWIM1Q9BR11 485 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 VPS16Q9H269 839 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 ECT2Q9H8V3 914 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 LMAN1LQ9HAT1 526 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 NMUR1Q9HB89 426 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 SIX2Q9NPC8 291 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.61■□□□□ 0.41
UBE3D-208ENST00000626828 CFAP97Q9P2B7 532 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 NDRG2Q9UN36 371 aaKnown RBP17.61■□□□□ 0.41
UBE3D-208ENST00000626828 WNT6Q9Y6F9 365 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 PATJQ8NI35 1801 aa17.61■□□□□ 0.41
UBE3D-208ENST00000626828 LRRC10BA6NIK2 292 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 TULP2O00295 520 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 TBX18O95935 607 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 ARSAP15289 507 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 RPS9P46781 194 aaKnown RBP17.6■□□□□ 0.41
UBE3D-208ENST00000626828 SOX9P48436 509 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 APBA1Q02410 837 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 FZD5Q13467 585 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 KRT31Q15323 416 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 EML3Q32P44 896 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 SCML4Q8N228 414 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 PRSS33Q8NF86 280 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 SHC3Q92529 594 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 EXOC4Q96A65 974 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 KLF16Q9BXK1 252 aaPredicted RBP17.6■□□□□ 0.41
UBE3D-208ENST00000626828 OSER1Q9NX31 292 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 TAB2Q9NYJ8 693 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 DNMT3LQ9UJW3 386 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 SH3BP1Q9Y3L3 701 aa17.6■□□□□ 0.41
UBE3D-208ENST00000626828 HELZP42694 1942 aaKnown RBP17.6■□□□□ 0.41
UBE3D-208ENST00000626828 MYOFQ9NZM1 2061 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 KIF26AQ9ULI4 1882 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-208ENST00000626828 OTOL1A6NHN0 477 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-208ENST00000626828 SMTNL1A8MU46 457 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 M0QYV0 167 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 FOXN3O00409 490 aaPredicted RBP17.59■□□□□ 0.41
UBE3D-208ENST00000626828 NFATC1O95644 943 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 CALCAP01258 141 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 BPIFB4P59827 614 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 PTK2Q05397 1052 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 GOLGA8FQ08AF8 430 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 GOLGA8DPQ0D2H9 430 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 MEA1Q16626 185 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 DGKKQ5KSL6 1271 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 C10orf120Q5SQS8 335 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 FKBP15Q5T1M5 1219 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 KLHDC7AQ5VTJ3 777 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 DPY19L2P1Q6NXN4 242 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 PMF1Q6P1K2 205 aa17.59■□□□□ 0.41
UBE3D-208ENST00000626828 SIX6OS1Q8N1H7 587 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms