RNA–Protein interactions for RNA: ENST00000625980.2

SPTAN1-211, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,713 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-211ENST00000625980 C11orf84Q9BUA3 381 aaPredicted RBP13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 NGRNQ9NPE2 291 aaKnown RBP13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 CALCOCO1Q9P1Z2 691 aa13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 NAALADL1Q9UQQ1 740 aa13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 BACE2Q9Y5Z0 518 aa13.49□□□□□ -0.25
SPTAN1-211ENST00000625980 TLL1O43897 1013 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 FGF18O76093 207 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 KRT1P04264 644 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 DNAJB2P25686 324 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 MATKP42679 507 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 GLUD2P49448 558 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 ELF2Q15723 593 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 DCAF6Q58WW2 860 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 ZFYVE27Q5T4F4 411 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 OTUD1Q5VV17 481 aaPredicted RBP13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 PM20D1Q6GTS8 502 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 VPS52Q8N1B4 723 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 UBXN4Q92575 508 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 C8orf48Q96LL4 319 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 SLC2A13Q96QE2 648 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 SLC9A7Q96T83 725 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 OXCT2Q9BYC2 517 aaPredicted RBP13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 AAASQ9NRG9 546 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 USP18Q9UMW8 372 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 PCDHB12Q9Y5F1 795 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
SPTAN1-211ENST00000625980 CCDC85CA6NKD9 419 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 TRIM66O15016 1216 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 ZRANB2O95218 330 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 LTFP02788 710 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 GLI1P08151 1106 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 HAPLN1P10915 354 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 PCK1P35558 622 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 PGFP49763 221 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SULT1E1P49888 294 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 HDAC4P56524 1084 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 MRPS25P82663 173 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 DUSP4Q13115 394 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 HADHQ16836 314 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 MGAT5BQ3V5L5 792 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 C9orf50Q5SZB4 431 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SLC13A5Q86YT5 568 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 CCDC50Q8IVM0 306 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 EXD1Q8NHP7 514 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 PHOSPHO2Q8TCD6 241 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SPPL2BQ8TCT7 592 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SP7Q8TDD2 431 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 CENPIQ92674 756 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 CLP1Q92989 425 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 RPGRIP1Q96KN7 1286 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SEPT5Q99719 369 aaPredicted RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 LAMA2P24043 3122 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 KRIT1O00522 736 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 URODP06132 367 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 RARAP10276 462 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 NOS2P35228 1153 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 PPM1AP35813 382 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 USP46P62068 366 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 ITIH3Q06033 890 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 RASIP1Q5U651 963 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 MFSD7Q6UXD7 560 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 POLNQ7Z5Q5 900 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SCML4Q8N228 414 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 MMGT1Q8N4V1 131 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 KLHL23Q8NBE8 558 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 IRGQQ8WZA9 623 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 HSPH1Q92598 858 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 EDEM1Q92611 657 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SLITRK1Q96PX8 696 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 NPY6RQ99463 290 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 HEMGNQ9BXL5 484 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 GPATCH2LQ9NWQ4 482 aa13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 DDX56Q9NY93 547 aaKnown RBP13.47□□□□□ -0.25
SPTAN1-211ENST00000625980 SYNJ2BP-COX16A0A087WUM0 186 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 LRRD1A4D1F6 860 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 CARNS1A5YM72 827 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 GRXCR1A8MXD5 290 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SART1O43290 800 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 ARHGEF15O94989 841 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SEC24AO95486 1093 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 KRT7P08729 469 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 RALAP11233 206 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 MYOGP15173 224 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 MTMR3Q13615 1198 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SIX1Q15475 284 aaPredicted RBP13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SLC25A52Q3SY17 297 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 BSPRYQ5W0U4 402 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SPRED2Q7Z698 418 aa13.46□□□□□ -0.25
SPTAN1-211ENST00000625980 SCD5Q86SK9 330 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms