RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 MIB1Q86YT6 1006 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 CBWD2Q8IUF1 395 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 ETFBKMTQ8IXQ9 262 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 CHPFQ8IZ52 775 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 TERB1Q8NA31 727 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 ELOVL4Q9GZR5 314 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 NACA2Q9H009 215 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 TMEM30AQ9NV96 361 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 NME7Q9Y5B8 376 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 LOC400499M0QZD8 3231 aa15.61■□□□□ 0.09
PNKP-218ENST00000625299 ZNF233A6NK53 670 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 HOXC11O43248 304 aaPredicted RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 NDUFS2O75306 463 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 ZNF217O75362 1048 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 PTPN1P18031 435 aaKnown RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 TXLNAP40222 546 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 TNNC1P63316 161 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 ALCAMQ13740 583 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 HECTD3Q5T447 861 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 GRAMD4Q6IC98 578 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 SDE2Q6IQ49 451 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 TMEM25Q86YD3 366 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 NAXDQ8IW45 347 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 NUP93Q8N1F7 819 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 PDZD8Q8NEN9 1154 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 OTUB2Q96DC9 234 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 TMX3Q96JJ7 454 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 ZFRQ96KR1 1074 aaKnown RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 ACOX2Q99424 681 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 SLC6A17Q9H1V8 727 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 CCDC86Q9H6F5 360 aaKnown RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 CCSER2Q9H7U1 834 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 CD93Q9NPY3 652 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 SPHK2Q9NRA0 654 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 OLFML3Q9NRN5 406 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 PANK4Q9NVE7 773 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 DNAAF2Q9NVR5 837 aaKnown RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 CHORDC1Q9UHD1 332 aaPredicted RBP15.6■□□□□ 0.09
PNKP-218ENST00000625299 SMC3Q9UQE7 1217 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 RAD54BQ9Y620 910 aa15.6■□□□□ 0.09
PNKP-218ENST00000625299 SMG1Q96Q15 3661 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 A0A1W2PQD8 194 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 A0A1W2PQF6 199 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 A8MXQ7 604 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 CLSTN1O94985 981 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 RTN3O95197 1032 aaPredicted RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 CAPNS1P04632 268 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 DLATP10515 647 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 MAOBP27338 520 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 SURF1Q15526 300 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 SOWAHCQ53LP3 525 aaPredicted RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 LARP1BQ659C4 914 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 KIAA1324Q6UXG2 1013 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 TRAPPC11Q7Z392 1133 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 BRAPQ7Z569 592 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 WDR49Q8IV35 697 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 KCNV2Q8TDN2 545 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 IPO4Q8TEX9 1081 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 ADAMTS14Q8WXS8 1223 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 MED10Q9BTT4 135 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 B3GNT5Q9BYG0 378 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 DNAJC17Q9NVM6 304 aaKnown RBP15.59■□□□□ 0.09
PNKP-218ENST00000625299 HCN2Q9UL51 889 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 CELSR3Q9NYQ7 3312 aa15.59■□□□□ 0.09
PNKP-218ENST00000625299 NEDD8-MDP1E9PL57 170 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 GNSP15586 552 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 TNNI1P19237 187 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 SLC14A1Q13336 389 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 WDR72Q3MJ13 1102 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 SYCP2LQ5T4T6 812 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 B3GALNT2Q8NCR0 500 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 SCAMP5Q8TAC9 235 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 MDM1Q8TC05 714 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 SCFD1Q8WVM8 642 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 HNRNPLLQ8WVV9 542 aaKnown RBP15.58■□□□□ 0.08
PNKP-218ENST00000625299 WBP2Q969T9 261 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 CLIC6Q96NY7 704 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 KCNK16Q96T55 309 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 FAM124BQ9H5Z6 455 aaPredicted RBP15.58■□□□□ 0.08
PNKP-218ENST00000625299 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 GMIPQ9P107 970 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 SUSD2Q9UGT4 822 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 CLIC4Q9Y696 253 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 PLXNB3Q9ULL4 1909 aa15.58■□□□□ 0.08
PNKP-218ENST00000625299 MEI4A8MW99 385 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 KIAA0391O15091 583 aaKnown RBP15.57■□□□□ 0.08
PNKP-218ENST00000625299 TACC1O75410 805 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 GJB3O75712 270 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 CST3P01034 146 aaPredicted RBP15.57■□□□□ 0.08
PNKP-218ENST00000625299 STAT6P42226 847 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 SLC5A3P53794 718 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 GRIK2Q13002 908 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 RABEP1Q15276 862 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 TPGS1Q6ZTW0 290 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 RDH13Q8NBN7 331 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 GLIS3Q8NEA6 775 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 SETD7Q8WTS6 366 aaKnown RBP15.57■□□□□ 0.08
PNKP-218ENST00000625299 OVCA2Q8WZ82 227 aa15.57■□□□□ 0.08
PNKP-218ENST00000625299 CCDC127Q96BQ5 260 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms