RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 ITPR1Q14643 2758 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 FAM92AA1XBS5 289 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SRRM3A6NNA2 597 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 A8MXQ7 604 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SLC9A3R1O14745 358 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 EIF3DO15371 548 aaKnown RBP eCLIP11.73□□□□□ -0.53
DDX41-218ENST00000625286 MAP3K13O43283 966 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 HYAL3O43820 417 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 VNN1O95497 513 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 STAU1O95793 577 aaKnown RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 TBX18O95935 607 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 WASP42768 502 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SEMA3BQ13214 749 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 HSF5Q4G112 596 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 EOGTQ5NDL2 527 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 KIAA1211LQ6NV74 962 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 CNNM4Q6P4Q7 775 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SHC4Q6S5L8 630 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 FAM35AQ86V20 835 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 WHAMMQ8TF30 809 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 SMOQ99835 787 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 ELOVL4Q9GZR5 314 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 KIAA1586Q9HCI6 787 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 POLMQ9NP87 494 aaPredicted RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 OSER1Q9NX31 292 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 GMIPQ9P107 970 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 KLK13Q9UKR3 277 aa11.73□□□□□ -0.53
DDX41-218ENST00000625286 R3HCC1Q9Y3T6 440 aaKnown RBP11.73□□□□□ -0.53
DDX41-218ENST00000625286 TBC1D3BA6NDS4 549 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 PRRT4C9JH25 899 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 TAF4O00268 1085 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 HOXC11O43248 304 aaPredicted RBP11.72□□□□□ -0.53
DDX41-218ENST00000625286 ALDH1A2O94788 518 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 ADH1CP00326 375 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 CAPNS1P04632 268 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 PDCP20941 246 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SLC5A3P53794 718 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 GAD2Q05329 585 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 ORC1Q13415 861 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 FAM26FQ5R3K3 315 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 HECTD3Q5T447 861 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 EGFLAMQ63HQ2 1017 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SLC41A1Q8IVJ1 513 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 FUKQ8N0W3 1084 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 XXYLT1Q8NBI6 393 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 FBXO32Q969P5 355 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 DHX58Q96C10 678 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SLITRK1Q96PX8 696 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 C7orf25Q9BPX7 421 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SLC6A17Q9H1V8 727 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 BLZF1Q9H2G9 400 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 CAPN10Q9HC96 672 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SPHK2Q9NRA0 654 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 EHD2Q9NZN4 543 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
DDX41-218ENST00000625286 TBC1D14Q9P2M4 693 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 HMGXB4Q9UGU5 601 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 MYH10P35580 1976 aa11.72□□□□□ -0.53
DDX41-218ENST00000625286 SMG1Q96Q15 3661 aaKnown RBP11.72□□□□□ -0.53
DDX41-218ENST00000625286 LOC400499M0QZD8 3231 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 IGHV1OR15-9A0A0B4J2B8 117 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 LRRIQ3A6PVS8 624 aaPredicted RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 C4BPAP04003 597 aaKnown RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 CISD3P0C7P0 127 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 IRF1P10914 325 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 CD59P13987 128 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 TNNC1P63316 161 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 ASIC1P78348 528 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 DLG4P78352 724 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 CLDN10P78369 228 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 LMAN2Q12907 356 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 SPDYCQ5MJ68 293 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 LYSMD4Q5XG99 296 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 TOGARAM2Q6ZUX3 1019 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 GPRIN1Q7Z2K8 1008 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 DDX42Q86XP3 938 aaKnown RBP eCLIP11.71□□□□□ -0.53
DDX41-218ENST00000625286 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 ZNF513Q8N8E2 541 aaPredicted RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 TERB1Q8NA31 727 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 OVCA2Q8WZ82 227 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 DUSP9Q99956 384 aaKnown RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 KLF16Q9BXK1 252 aaPredicted RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 NUSAP1Q9BXS6 441 aaKnown RBP11.71□□□□□ -0.53
DDX41-218ENST00000625286 VRTNQ9H8Y1 702 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 SLC39A2Q9NP94 309 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 CALCOCO1Q9P1Z2 691 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 STARD13Q9Y3M8 1113 aa11.71□□□□□ -0.53
DDX41-218ENST00000625286 PLXNB3Q9ULL4 1909 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.7□□□□□ -0.54
DDX41-218ENST00000625286 WASH3PC4AMC7 463 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 HHLA1C9JL84 531 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
DDX41-218ENST00000625286 SPTLC2O15270 562 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms