RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 NME7Q9Y5B8 376 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 TTC3P53804 2025 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 ENO4A6NNW6 628 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 I3L4J1 428 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 ABL2P42684 1182 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 SOWAHAQ2M3V2 549 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 NOMO2Q5JPE7 1267 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 VSTM1Q6UX27 236 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 CCDC105Q8IYK2 499 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 FBF1Q8TES7 1133 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 DDX1Q92499 740 aaKnown RBP12.1□□□□□ -0.47
ATRX-213ENST00000624032 TSPAN18Q96SJ8 248 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 ZSWIM1Q9BR11 485 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 YIPF3Q9GZM5 350 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 ELOVL4Q9GZR5 314 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 CNTN6Q9UQ52 1028 aa12.1□□□□□ -0.47
ATRX-213ENST00000624032 STAU1O95793 577 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 TAF6P49848 677 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 C11orf63Q6NUN7 778 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 TGS1Q96RS0 853 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 OSBPL1AQ9BXW6 950 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 ETNK1Q9HBU6 452 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 MICAL3Q7RTP6 2002 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 UNC5CO95185 931 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 ITGB1P05556 798 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 BRD2P25440 801 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 ZNF132P52740 706 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 FMO1Q01740 532 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 UPP1Q16831 310 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 RNF43Q68DV7 783 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 FAM117BQ6P1L5 589 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 GDAP1Q8TB36 358 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 TFAP2BQ92481 460 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 KRT35Q92764 455 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 MLXIPLQ9NP71 852 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 TXLNGQ9NUQ3 528 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 TBC1D13Q9NVG8 400 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 DNAJB4Q9UDY4 337 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 MTUS1Q9ULD2 1270 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
ATRX-213ENST00000624032 PARNO95453 639 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 ACSL3O95573 720 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 P4HA1P13674 534 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CREB1P16220 341 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 GNA15P30679 374 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 STX2P32856 288 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 COILP38432 576 aaPredicted RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 NDST1P52848 882 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 RAD23BP54727 409 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CCDC15Q0P6D6 951 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 IKBKEQ14164 716 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 PASD1Q8IV76 773 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 C7orf61Q8IZ16 206 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CRIPAKQ8N1N5 446 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 ZNF560Q96MR9 790 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
ATRX-213ENST00000624032 DDX23Q9BUQ8 820 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 CDC42EP4Q9H3Q1 356 aaKnown RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
ATRX-213ENST00000624032 HGSO14964 777 aaPredicted RBP12.08□□□□□ -0.48
ATRX-213ENST00000624032 THAP12O43422 761 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CILPO75339 1184 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 SYN1P17600 705 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 BRCC3P46736 316 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 MARCKSL1P49006 195 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 RNASELQ05823 741 aaKnown RBP12.08□□□□□ -0.48
ATRX-213ENST00000624032 TUSC3Q13454 348 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CD300LGQ6UXG3 332 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 EGFL6Q8IUX8 553 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 ZDHHC14Q8IZN3 488 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 TMEM110-MUSTN1A8MSY1 372 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CYB561D2O14569 222 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 B3GAT3O94766 335 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 PDGFRBP09619 1106 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 BRAFP15056 766 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CD19P15391 556 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CDR2Q01850 454 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 CYP1B1Q16678 543 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 SV2CQ496J9 727 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 ABI1Q8IZP0 508 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 SLC4A11Q8NBS3 891 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 OR6B3Q8NGW1 331 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 URGCPQ8TCY9 931 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 GRAMD1AQ96CP6 724 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 ELAC1Q9H777 363 aaKnown RBP12.08□□□□□ -0.48
ATRX-213ENST00000624032 CYP3A43Q9HB55 503 aa12.08□□□□□ -0.48
ATRX-213ENST00000624032 TBKBP1A7MCY6 615 aa12.07□□□□□ -0.48
ATRX-213ENST00000624032 INPPL1O15357 1258 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms