RNA–Protein interactions for RNA: ENST00000621987.4

FMR1-220, Transcript of fragile X mental retardation 1, humanhuman

TSL 5 BASIC

Gene FMR1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-220ENST00000621987 RPGRIP1Q96KN7 1286 aa13.46□□□□□ -0.25
FMR1-220ENST00000621987 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.25
FMR1-220ENST00000621987 NCAPGQ9BPX3 1015 aa13.46□□□□□ -0.25
FMR1-220ENST00000621987 ADAM33Q9BZ11 813 aa13.46□□□□□ -0.25
FMR1-220ENST00000621987 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
FMR1-220ENST00000621987 HSFX1Q9UBD0 423 aa13.46□□□□□ -0.25
FMR1-220ENST00000621987 AFF4Q9UHB7 1163 aaKnown RBP13.46□□□□□ -0.25
FMR1-220ENST00000621987 FAM92AA1XBS5 289 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CTAGE15A4D2H0 777 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 EFCAB8A8MWE9 144 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 ENDOD1O94919 500 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 TRUB2O95900 331 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 LTFP02788 710 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CTAGE8P0CG41 777 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CTSAP10619 480 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 IL1R2P27930 398 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 MIPP30301 263 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SSR1P43307 286 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 RPL10AP62906 217 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 CREMQ03060 361 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 DUSP4Q13115 394 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 ZNF211Q13398 564 aaPredicted RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 CLUL1Q15846 466 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 SLC25A52Q3SY17 297 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 RAB6CQ53S08 254 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 OTUD1Q5VV17 481 aaPredicted RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 CYP4V2Q6ZWL3 525 aaPredicted RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 RSRC2Q7L4I2 434 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 STRADAQ7RTN6 431 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CTAGE6Q86UF2 777 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CTAGE4Q8IX94 777 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 NUP93Q8N1F7 819 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 EXD1Q8NHP7 514 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 ZNF461Q8TAF7 563 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 FAM172AQ8WUF8 416 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 FAM149B1Q96BN6 582 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 NPY6RQ99463 290 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 PLVAPQ9BX97 442 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 RAB6CQ9H0N0 254 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
FMR1-220ENST00000621987 MRPL17Q9NRX2 175 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 COMMD8Q9NX08 183 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 DDX56Q9NY93 547 aaKnown RBP13.45□□□□□ -0.26
FMR1-220ENST00000621987 LZTS1Q9Y250 596 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SLC27A5Q9Y2P5 690 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 RWDD3Q9Y3V2 267 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 KRT7P08729 469 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 ATF2P15336 505 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 DESP17661 470 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 HDAC4P56524 1084 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 ATP11AP98196 1134 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SHHQ15465 462 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 ATP13A4Q4VNC1 1196 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SDHAF4Q5VUM1 108 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SYPL2Q5VXT5 272 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 AADACL2Q6P093 401 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SCD5Q86SK9 330 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SPATA4Q8NEY3 305 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 PEBP4Q96S96 227 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 TBCBQ99426 244 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 TRIM62Q9BVG3 475 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 MAFFQ9ULX9 164 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 USP18Q9UMW8 372 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 NAALADL1Q9UQQ1 740 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SCML2Q9UQR0 700 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 SSX2IPQ9Y2D8 614 aa13.45□□□□□ -0.26
FMR1-220ENST00000621987 GREB1Q4ZG55 1949 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 GBF1Q92538 1859 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 MYO16Q9Y6X6 1858 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 C5orf67F2Z3F1 127 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 SOAT2O75908 522 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 RTN3O95197 1032 aaPredicted RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 ZRANB2O95218 330 aaKnown RBP eCLIP13.44□□□□□ -0.26
FMR1-220ENST00000621987 SEC24AO95486 1093 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 FGGP02679 453 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 ATF6P18850 670 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 CTNNB1P35222 781 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 PTPN7P35236 360 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 USP46P62068 366 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 PITX1P78337 314 aaPredicted RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 TAZQ16635 292 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 CDO1Q16878 200 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 DCAF6Q58WW2 860 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 SEL1L2Q5TEA6 688 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 BSPRYQ5W0U4 402 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 RCOR2Q8IZ40 523 aa13.44□□□□□ -0.26
FMR1-220ENST00000621987 CMASQ8NFW8 434 aaPredicted RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 PGAP3Q96FM1 320 aaPredicted RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 RBM41Q96IZ5 413 aaKnown RBP13.44□□□□□ -0.26
FMR1-220ENST00000621987 NAP1L3Q99457 506 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms