RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 DUSP16Q9BY84 665 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 CISHQ9NSE2 258 aa21.66■■□□□ 1.06
SMC6-210ENST00000621152 ARMCX3Q9UH62 379 aaPredicted RBP21.66■■□□□ 1.06
SMC6-210ENST00000621152 K7EQS6 105 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 GADD45BO75293 160 aaPredicted RBP21.65■■□□□ 1.06
SMC6-210ENST00000621152 IRF1P10914 325 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 SYT13Q7L8C5 426 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 WBP2Q969T9 261 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 PNKPQ96T60 521 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 USP18Q9UMW8 372 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 CFAP54Q96N23 3096 aa21.65■■□□□ 1.06
SMC6-210ENST00000621152 EP300Q09472 2414 aaPredicted RBP21.64■■□□□ 1.05
SMC6-210ENST00000621152 CCDC163A0A0D9SF12 145 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 PSMA7O14818 248 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 CYP26A1O43174 497 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 ADH1CP00326 375 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 RETP07949 1114 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 CD44P16070 742 aaKnown RBP21.64■■□□□ 1.05
SMC6-210ENST00000621152 TGM1P22735 817 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 ATP5C1P36542 298 aaKnown RBP21.64■■□□□ 1.05
SMC6-210ENST00000621152 RAD23BP54727 409 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 SEC13P55735 322 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 SPEM2Q0P670 501 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 C2orf27AQ580R0 203 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 LY6G5CQ5SRR4 150 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 BBS7Q8IWZ6 715 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 SLC4A11Q8NBS3 891 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 USP33Q8TEY7 942 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 OTUB2Q96DC9 234 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 HHIPQ96QV1 700 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 ARID3AQ99856 593 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 PNPLA8Q9NP80 782 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 OSER1Q9NX31 292 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 COQ4Q9Y3A0 265 aa21.64■■□□□ 1.05
SMC6-210ENST00000621152 A0A1W2PQH9 124 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 ANTXRLA6NF34 631 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 ADH5P11766 374 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 KIF11P52732 1056 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 GAD2Q05329 585 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 DMC1Q14565 340 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 KLHL10Q6JEL2 608 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.63■■□□□ 1.05
SMC6-210ENST00000621152 ACDQ96AP0 544 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 KLF16Q9BXK1 252 aaPredicted RBP21.63■■□□□ 1.05
SMC6-210ENST00000621152 NMUR1Q9HB89 426 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 METTL14Q9HCE5 456 aaKnown RBP21.63■■□□□ 1.05
SMC6-210ENST00000621152 PARD6AQ9NPB6 346 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 CYLDQ9NQC7 956 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 NUDT5Q9UKK9 219 aa21.63■■□□□ 1.05
SMC6-210ENST00000621152 ATG2BQ96BY7 2078 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 RPP40O75818 363 aaKnown RBP21.62■■□□□ 1.05
SMC6-210ENST00000621152 APODP05090 189 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 RARGP13631 454 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 PPP1R2P41236 205 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 RSPO4Q2I0M5 234 aaPredicted RBP21.62■■□□□ 1.05
SMC6-210ENST00000621152 C12orf40Q86WS4 652 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 CCDC33Q8N5R6 958 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 FAM160A2Q8N612 972 aaPredicted RBP21.62■■□□□ 1.05
SMC6-210ENST00000621152 NAT16Q8N8M0 369 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 GAB3Q8WWW8 586 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 SLC35C1Q96A29 364 aa21.62■■□□□ 1.05
SMC6-210ENST00000621152 PPP1R3GB7ZBB8 358 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 AXIN1O15169 862 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 KAT7O95251 611 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 CCDC192P0DO97 292 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 PLA2G4AP47712 749 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 LRMPQ12912 555 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 CUL2Q13617 745 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 ANO4Q32M45 955 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 BTBD8Q5XKL5 378 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 HTR3DQ70Z44 454 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 CACNA2D4Q7Z3S7 1137 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 SCD5Q86SK9 330 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 TMEM25Q86YD3 366 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 SFTPA1Q8IWL2 248 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 CEP63Q96MT8 703 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 DUSP9Q99956 384 aaKnown RBP21.61■■□□□ 1.05
SMC6-210ENST00000621152 UBXN6Q9BZV1 441 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 FAM124BQ9H5Z6 455 aaPredicted RBP21.61■■□□□ 1.05
SMC6-210ENST00000621152 ARHGEF4Q9NR80 690 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 SPHK2Q9NRA0 654 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.61■■□□□ 1.05
SMC6-210ENST00000621152 DNMT3LQ9UJW3 386 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 NAGPAQ9UK23 515 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 USP3Q9Y6I4 520 aa21.61■■□□□ 1.05
SMC6-210ENST00000621152 HELZP42694 1942 aaKnown RBP21.61■■□□□ 1.05
SMC6-210ENST00000621152 OTOGLQ3ZCN5 2332 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 A0A0A0MRY4 1105 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 BIN1O00499 593 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 MDM4O15151 490 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 APBB3O95704 486 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 BMP6P22004 513 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 EIF2DP41214 584 aaKnown RBP21.6■■□□□ 1.05
SMC6-210ENST00000621152 GRIA2P42262 883 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 PSEN1P49768 467 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 MRPS21P82921 87 aaKnown RBP21.6■■□□□ 1.05
SMC6-210ENST00000621152 GOLGA8FQ08AF8 430 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 GOLGA8DPQ0D2H9 430 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 MESP2Q0VG99 397 aa21.6■■□□□ 1.05
SMC6-210ENST00000621152 PUM1Q14671 1186 aaKnown RBP eCLIP21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms