RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 FAM153AQ9UHL3 310 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 PCDHB5Q9Y5E4 795 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 PCDHA3Q9Y5H8 950 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 MTSS1O43312 755 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 AKT1P31749 480 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 DDI1Q8WTU0 396 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 RUBCNQ92622 972 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 DMAP1Q9NPF5 467 aaPredicted RBP12.72□□□□□ -0.37
GTF2I-218ENST00000620879 OLA1Q9NTK5 396 aaKnown RBP12.72□□□□□ -0.37
GTF2I-218ENST00000620879 ARHGAP28Q9P2N2 729 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 A0A1B0GUA9 196 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 GPR25O00155 361 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 FBXO21O94952 628 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 KRT4P19013 534 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 LSP1P33241 339 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 CNGA2Q16280 664 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 ANGPTL8Q6UXH0 198 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 RFX8Q6ZV50 586 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 ANKRD23Q86SG2 305 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 HELQQ8TDG4 1101 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 LRRN4Q8WUT4 740 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 ELMO2Q96JJ3 720 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 FOXP3Q9BZS1 431 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 NPHS2Q9NP85 383 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 AVENQ9NQS1 362 aaPredicted RBP12.72□□□□□ -0.37
GTF2I-218ENST00000620879 CASZ1Q86V15 1759 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 H7C4K7 107 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 M0R2N6 131 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 CLDN5O00501 218 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 CAND2O75155 1236 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 PBX1P40424 430 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 BRCC3P46736 316 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 SLC6A3Q01959 620 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 SNCBQ16143 134 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 SDHAF4Q5VUM1 108 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 PALB2Q86YC2 1186 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 NT5DC4Q86YG4 428 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 CCDC124Q96CT7 223 aaKnown RBP12.72□□□□□ -0.37
GTF2I-218ENST00000620879 SUN2Q9UH99 717 aa12.72□□□□□ -0.37
GTF2I-218ENST00000620879 UMODL1Q5DID0 1318 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 RARGP13631 454 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 SMPD1P17405 629 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 IRAK1P51617 712 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 VCPP55072 806 aaKnown RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ELAVL2Q12926 359 aaKnown RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ERMARDQ5T6L9 678 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 SPATA24Q86W54 205 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 DAW1Q8N136 415 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 NETO2Q8NC67 525 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 SMARCD1Q96GM5 515 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 CAPNS2Q96L46 248 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 XPO6Q96QU8 1125 aaKnown RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 XAB2Q9HCS7 855 aaKnown RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 FAM105AQ9NUU6 356 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 RBM22Q9NW64 420 aaKnown RBP eCLIP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 IRAK4Q9NWZ3 460 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.71□□□□□ -0.37
GTF2I-218ENST00000620879 CBX4O00257 560 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 USP12O75317 370 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 MYL4P12829 197 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 CCR1P32246 355 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 MAMLD1Q13495 774 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 LRIG3Q6UXM1 1119 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ACAD11Q709F0 780 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 DDIASQ8IXT1 998 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ARHGAP18Q8N392 663 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 CD99L2Q8TCZ2 262 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 NT5MQ9NPB1 228 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 NID2Q14112 1375 aa12.71□□□□□ -0.37
GTF2I-218ENST00000620879 ZNF536O15090 1300 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 PRR23AA6NEV1 266 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 LTFP02788 710 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 ASGR1P07306 291 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 TPH1P17752 444 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 PDAP1Q13442 181 aaKnown RBP12.71□□□□□ -0.38
GTF2I-218ENST00000620879 CCL14Q16627 93 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 UGP2Q16851 508 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 GBP7Q8N8V2 638 aaPredicted RBP12.71□□□□□ -0.38
GTF2I-218ENST00000620879 ARMC2Q8NEN0 867 aa12.71□□□□□ -0.38
GTF2I-218ENST00000620879 SMG5Q9UPR3 1016 aaKnown RBP12.71□□□□□ -0.38
GTF2I-218ENST00000620879 BAZ2AQ9UIF9 1905 aaKnown RBP12.7□□□□□ -0.38
GTF2I-218ENST00000620879 LRRC37A3O60309 1634 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 GOLGA8QA0A0J9YX86 632 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 GOLGA8OA6NCC3 632 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 GOLGA8NF8WBI6 632 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 TSPAN3O60637 253 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 DARSP14868 501 aaKnown RBP12.7□□□□□ -0.38
GTF2I-218ENST00000620879 RPL21P46778 160 aaKnown RBP12.7□□□□□ -0.38
GTF2I-218ENST00000620879 ITGA7Q13683 1181 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 ZCWPW2Q504Y3 356 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 MFSD14AQ96MC6 490 aa12.7□□□□□ -0.38
GTF2I-218ENST00000620879 DCLK3Q9C098 648 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms