RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 TMEM270Q6UE05 265 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 YTHDF3Q7Z739 585 aaKnown RBP7.4□□□□□ -1.23
COLCA1-205ENST00000620864 CDK20Q8IZL9 346 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 CACTIN-AS1Q8N1I8 211 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 SKA1Q96BD8 255 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ELMO2Q96JJ3 720 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 MED15Q96RN5 788 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 PCIF1Q9H4Z3 704 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 SLC28A3Q9HAS3 691 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 TMCO1Q9UM00 188 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 EFR3BQ9Y2G0 817 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 PKP3Q9Y446 797 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 AK9Q5TCS8 1911 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 TNFRSF21O75509 655 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ADORA1P30542 326 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 FLT3P36888 993 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 STAT3P40763 770 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 NAPEPLDQ6IQ20 393 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 PPP1R14AQ96A00 147 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF333Q96JL9 665 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 TNIP3Q96KP6 325 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 RACGAP1Q9H0H5 632 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 GPAMQ9HCL2 828 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 HSPBP1Q9NZL4 362 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.4□□□□□ -1.23
COLCA1-205ENST00000620864 ATXN10Q9UBB4 475 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 CIDEBQ9UHD4 219 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 SLC24A2Q9UI40 661 aa7.4□□□□□ -1.23
COLCA1-205ENST00000620864 METTL21EPA6NDL7 271 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PDE8BO95263 885 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 WEE2P0C1S8 567 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CDH3P22223 829 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 KIZQ2M2Z5 673 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 RNF135Q8IUD6 432 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 GSPT2Q8IYD1 628 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CENPIQ92674 756 aaPredicted RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MFSD14AQ96MC6 490 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 UBP1Q9NZI7 540 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PHTF1Q9UMS5 762 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 SNX13Q9Y5W8 968 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MYOM2P54296 1465 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 HEATR9A2RTY3 570 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 KCNN4O15554 427 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PRKAR1AP10644 381 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ATP1A3P13637 1013 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MAPK6Q16659 721 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CYP51A1Q16850 503 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF568Q3ZCX4 644 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 SEL1L3Q68CR1 1132 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ESRP1Q6NXG1 681 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CASP12Q6UXS9 341 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TMEM26Q6ZUK4 368 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 KYQ8NBH2 561 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 RNF25Q96BH1 459 aaPredicted RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 Q96MT0 163 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 INTS2Q9H0H0 1204 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CD274Q9NZQ7 290 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TRMT6Q9UJA5 497 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 HBS1LQ9Y450 684 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 SNX9Q9Y5X1 595 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 A0A0X1KG70 313 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 FAM20BO75063 409 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ALOX12P18054 663 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 QARSP47897 775 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 POU4F1Q01851 419 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 CHI3L2Q15782 390 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 BTBD8Q5XKL5 378 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PRR5LQ6MZQ0 368 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TSHZ1Q6ZSZ6 1077 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MYOZ2Q9NPC6 264 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 POLG2Q9UHN1 485 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ESYT3A0FGR9 886 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 SUPT3HB4E1H0 165 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PDXKO00764 312 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MYL12BO14950 172 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 RARBP10826 455 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TARSP26639 723 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PPP2R1BP30154 601 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 EIF2S3P41091 472 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 GTF2A2P52657 109 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 NR1H2P55055 460 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PADI6Q6TGC4 694 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 LRRC74BQ6ZQY2 392 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 OR6J1Q8NGC5 347 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 ATXN2LQ8WWM7 1075 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 LENG1Q96BZ8 264 aaPredicted RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 NUDT12Q9BQG2 462 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 NUAK2Q9H093 628 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 EPB41L4BQ9H329 900 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PCMTD2Q9NV79 361 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 BAIAP2Q9UQB8 552 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 MED14O60244 1454 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 STIP1P31948 543 aaKnown RBP7.39□□□□□ -1.23
COLCA1-205ENST00000620864 AKR1D1P51857 326 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TPI1P60174 286 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 PKP1Q13835 747 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 TYSND1Q2T9J0 566 aa7.39□□□□□ -1.23
COLCA1-205ENST00000620864 SYDE2Q5VT97 1194 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms