RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	BANP	Q8N9N5	519 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PCDH19	Q8TAB3	1148 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	AGAP11	Q8TF27	550 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	C18orf25	Q96B23	403 aa	Predicted RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	STAMBPL1	Q96FJ0	436 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	MYCBP	Q99417	103 aa	Predicted RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CYTH2	Q99418	400 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	NME7	Q9Y5B8	376 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	APOL1	O14791	398 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	LPXN	O60711	386 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	APRT	P07741	180 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	RPSA	P08865	295 aa	Known RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PYGB	P11216	843 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	NEFH	P12036	1026 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	SLC8A1	P32418	973 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	ZNF200	P98182	395 aa	Predicted RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	KCNJ11	Q14654	390 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	RASA2	Q15283	850 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PLEKHG4	Q58EX7	1191 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	FAM47C	Q5HY64	1035 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	MARCH8	Q5T0T0	291 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	MAP7D3	Q8IWC1	876 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	OR6B3	Q8NGW1	331 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CCDC110	Q8TBZ0	833 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CLEC4C	Q8WTT0	213 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PTPRN2	Q92932	1015 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	TRIM56	Q9BRZ2	755 aa	Known RBP	11.67	□□□□□ -0.54
TP53-223	ENST00000618944	APOL6	Q9BWW8	343 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	DPEP3	Q9H4B8	488 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	PPCS	Q9HAB8	311 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	CDHR5	Q9HBB8	845 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	SETD4	Q9NVD3	440 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	TUBGCP4	Q9UGJ1	667 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	NR2E3	Q9Y5X4	410 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	TEX264	Q9Y6I9	313 aa		11.67	□□□□□ -0.54
TP53-223	ENST00000618944	MCM3AP	O60318	1980 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	PAPPA2	Q9BXP8	1791 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944		F5H423	210 aa	Predicted RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	CBX6	O95503	412 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	INHBA	P08476	426 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	EZR	P15311	586 aa	Known RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	SDC4	P31431	198 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	GRIK4	Q16099	956 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	TAF1B	Q53T94	588 aa	Predicted RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	WLS	Q5T9L3	541 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	OLFML1	Q6UWY5	402 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	RGS9BP	Q6ZS82	235 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	LRRC6	Q86X45	466 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	PPM1N	Q8N819	430 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	RFWD2	Q8NHY2	731 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	PPTC7	Q8NI37	304 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	MAGEC3	Q8TD91	643 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	C10orf82	Q8WW14	230 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	TTC17	Q96AE7	1141 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	FAXDC2	Q96IV6	333 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	SNRNP25	Q9BV90	132 aa	Known RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	EIF2A	Q9BY44	585 aa	Known RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	MANSC1	Q9H8J5	431 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	PCDH18	Q9HCL0	1135 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	C2CD2	Q9Y426	696 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	LOC285556	D6RIA3	1793 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	CXorf49	A8MYA2	514 aa	Predicted RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	PAPSS1	O43252	624 aa	Predicted RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	CCNB1	P14635	433 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	ALDH3A1	P30838	453 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	MAP2K2	P36507	400 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	SLC6A3	Q01959	620 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	CCDC15	Q0P6D6	951 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	ZNF792	Q3KQV3	632 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	BOLA3	Q53S33	107 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	MTDH	Q86UE4	582 aa	Known RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	ZNF276	Q8N554	614 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	NETO2	Q8NC67	525 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	GPRC5A	Q8NFJ5	357 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	UTP4	Q969X6	686 aa	Known RBP	11.66	□□□□□ -0.54
TP53-223	ENST00000618944	FAM111A	Q96PZ2	611 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	KIAA1257	Q9ULG3	409 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	MGAM	O43451	1857 aa		11.66	□□□□□ -0.54
TP53-223	ENST00000618944	ZBED1	O96006	694 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	LCP1	P13796	627 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	AKAP5	P24588	427 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	ADORA2B	P29275	332 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	HDAC4	P56524	1084 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	RIPK1	Q13546	671 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	SESTD1	Q86VW0	696 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	SLC44A1	Q8WWI5	657 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	DHX35	Q9H5Z1	703 aa	Known RBP	11.65	□□□□□ -0.54
TP53-223	ENST00000618944	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.65	□□□□□ -0.54
TP53-223	ENST00000618944	PAK5	Q9P286	719 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	FETUB	Q9UGM5	382 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	NUMBL	Q9Y6R0	609 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944	PTPRF	P10586	1907 aa		11.65	□□□□□ -0.54
TP53-223	ENST00000618944		A0A0G2JND7	137 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	IQANK1	A0A1B0GTG1	560 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944		A8MXQ7	604 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	UGT1A9	O60656	530 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	ANP32D	O95626	131 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	T-ENOL	P0DO92	83 aa		11.65	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms