RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	NCF1C	A8MVU1	366 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	UBE2C	O00762	179 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MEFV	O15553	781 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EFCAB14	O75071	495 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CLPTM1	O96005	669 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GJB1	P08034	283 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SNRPA	P09012	282 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DLD	P09622	509 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CKMT1A	P12532	417 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	BMP8B	P34820	402 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SERPINB6	P35237	376 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ME1	P48163	572 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GDI2	P50395	445 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EPHA4	P54764	986 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PTPN5	P54829	565 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CSTF3	Q12996	717 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ADIPOQ	Q15848	244 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DGKK	Q5KSL6	1271 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	C12orf60	Q5U649	245 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	INTS5	Q6P9B9	1019 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TTC23L	Q6PF05	361 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SPATC1	Q76KD6	591 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PLEKHH3	Q7Z736	793 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	VPS36	Q86VN1	386 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNF321P	Q8N8H1	164 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FAM133A	Q8N9E0	248 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNF511	Q8NB15	262 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ATAD1	Q8NBU5	361 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RBBP8NL	Q8NC74	664 aa	Predicted RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LINS1	Q8NG48	757 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	IP6K1	Q92551	441 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KRT35	Q92764	455 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DPF2	Q92785	391 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ADAD1	Q96M93	576 aa	Known RBP	4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC42	Q96M95	316 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CDC6	Q99741	560 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ISCU	Q9H1K1	167 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SMOC1	Q9H4F8	434 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZBTB40	Q9NUA8	1239 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TRPS1	Q9UHF7	1281 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ANKRD30A	Q9BXX3	1397 aa		4.27	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DVL2	O14641	736 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SMAD7	O15105	426 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SEC31A	O94979	1220 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DLGAP3	O95886	979 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ACAA1	P09110	424 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DHRS4L1	P0CG22	281 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	VCL	P18206	1134 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PTBP1	P26599	531 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC26A3	P40879	764 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MSH2	P43246	934 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ACADVL	P49748	655 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KCNJ10	P78508	379 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SLC39A14	Q15043	492 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LIN9	Q5TKA1	542 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DCLRE1A	Q6PJP8	1040 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	HCAR2	Q8TDS4	363 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DQX1	Q8TE96	717 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GANC	Q8TET4	914 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SEPT8	Q92599	483 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	WNT2B	Q93097	391 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZBED3	Q96IU2	234 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	DCAF5	Q96JK2	942 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CCDC43	Q96MW1	224 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PPP1R16B	Q96T49	567 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FAM83C	Q9BQN1	747 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MRPL37	Q9BZE1	423 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	REXO4	Q9GZR2	422 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RHBG	Q9H310	441 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	AAAS	Q9NRG9	546 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	OLA1	Q9NTK5	396 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	POLR3B	Q9NW08	1133 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	COX16	Q9P0S2	106 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	RUVBL1	Q9Y265	456 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	KIAA1217	Q5T5P2	1943 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836		A0A1B0GVG6	124 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FRMD3	A2A2Y4	597 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836		H7BY64	318 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	TPP1	O14773	563 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	MAN1A2	O60476	641 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	LRG1	P02750	347 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	EIF2S1	P05198	315 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	FGF4	P08620	206 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CLTB	P09497	229 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GSTT2	P0CG29	244 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GSTT2B	P0CG30	244 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PF4V1	P10720	104 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CRABP2	P29373	138 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	PDIA3	P30101	505 aa	Known RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CIITA	P33076	1130 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	STAT5A	P42229	794 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	GPR3	P46089	330 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	CACNB3	P54284	484 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	IFI35	P80217	286 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ZNF252P-AS1	Q0IIN9	211 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ITGB3BP	Q13352	177 aa	Predicted RBP	4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	SGCA	Q16586	387 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	ABCB5	Q2M3G0	1257 aa		4.26	□□□□□ -1.73
UBE2D3-233	ENST00000618836	INAVA	Q3KP66	663 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms