RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 ELK3P41970 407 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 MLLT3P42568 568 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GPD2P43304 727 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 NEK3P51956 506 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GEMIN4P57678 1058 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 PSMC1P62191 440 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 LMNB2Q03252 620 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 KCNJ11Q14654 390 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CA9Q16790 459 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SGSM1Q2NKQ1 1148 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 C15orf59Q2T9L4 293 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 BBS9Q3SYG4 887 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TAF1BQ53T94 588 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 DALRD3Q5D0E6 543 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 NOL9Q5SY16 702 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GJC2Q5T442 439 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 FAXCQ5TGI0 409 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 ATF7IP2Q5U623 682 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 JADE1Q6IE81 842 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 MRPL14Q6P1L8 145 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 MPZL3Q6UWV2 235 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TSHZ1Q6ZSZ6 1077 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 C3orf62Q6ZUJ4 267 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TTC7BQ86TV6 843 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 LRRC6Q86X45 466 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC125Q86Z20 511 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 PQLC3Q8N755 202 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 PLD5Q8N7P1 536 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GBP7Q8N8V2 638 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CHST13Q8NET6 341 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CMASQ8NFW8 434 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TTC8Q8TAM2 541 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 UBA3Q8TBC4 463 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CCHCR1Q8TD31 782 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 FNIP1Q8TF40 1166 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 HSPH1Q92598 858 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 NLRP4Q96MN2 994 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SMC6Q96SB8 1091 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 PPP1R16BQ96T49 567 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 LPIN3Q9BQK8 851 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC77Q9BR77 488 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TBC1D10AQ9BXI6 508 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF518BQ9C0D4 1074 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 LHX5Q9H2C1 402 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 IFT122Q9HBG6 1241 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 USP29Q9HBJ7 922 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 ARHGEF4Q9NR80 690 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 FBXO6Q9NRD1 293 aaPredicted RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SMYD2Q9NRG4 433 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GPATCH2LQ9NWQ4 482 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SLC5A4Q9NY91 659 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 DDX56Q9NY93 547 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 CNTN3Q9P232 1028 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SLC24A2Q9UI40 661 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 XPO7Q9UIA9 1087 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 GJD2Q9UKL4 321 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 SMG5Q9UPR3 1016 aaKnown RBP4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TTLL3Q9Y4R7 772 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 TEX264Q9Y6I9 313 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 USH1CQ9Y6N9 552 aa4.51□□□□□ -1.69
SEC22B-202ENST00000618538 HMX2A2RU54 273 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 EIF4E1BA6NMX2 242 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LACTBL1A8MY62 500 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 APOC4-APOC2K7ER74 178 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PPEF2O14830 753 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 HCRTO43612 131 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ENTPD5O75356 428 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 GRAP2O75791 330 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C22orf31O95567 290 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 APOC2P02655 101 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 KRT19P08727 400 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 RBP3P10745 1247 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 EZRP15311 586 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 GABRB2P47870 512 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 EFNA5P52803 228 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 AP3M2P53677 418 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 EIF3EP60228 445 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 YWHAEP62258 255 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 YWHAZP63104 245 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 LACTBP83111 547 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 TAP1Q03518 808 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 PTPN11Q06124 597 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FAAP100Q0VG06 881 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 DPYSL3Q14195 570 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NOMO1Q15155 1222 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 KBTBD12Q3ZCT8 623 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ZC3H12AQ5D1E8 599 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 IER5Q5VY09 327 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC62Q6P9F0 684 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FAM183BPQ6ZVS7 135 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF534Q76KX8 674 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 NLRP9Q7RTR0 991 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 CLNKQ7Z7G1 428 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 MTDHQ86UE4 582 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ZC3H18Q86VM9 953 aaKnown RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 RIOX2Q8IUF8 465 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 FBXO16Q8IX29 292 aaPredicted RBP4.5□□□□□ -1.69
SEC22B-202ENST00000618538 C12orf29Q8N999 325 aa4.5□□□□□ -1.69
SEC22B-202ENST00000618538 ATP11CQ8NB49 1132 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms