RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ATG2BQ96BY7 2078 aa23.31■■□□□ 1.32
SYNGR3-206ENST00000618464 SLC9A3R1O14745 358 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 HRO43593 1189 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 PAPSS2O95340 614 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 CYP17A1P05093 508 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 TUBP50607 506 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 RAD23BP54727 409 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 SRSF5Q13243 272 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 MORC3Q14149 939 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 CCDC40Q4G0X9 1142 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 SLC4A11Q8NBS3 891 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 EZH1Q92800 747 aaPredicted RBP23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 SLC35C1Q96A29 364 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 TLR8Q9NR97 1041 aaKnown RBP23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 GMEB2Q9UKD1 530 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 USP18Q9UMW8 372 aa23.3■■□□□ 1.32
SYNGR3-206ENST00000618464 PPP1R3GB7ZBB8 358 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 TLR5O60602 858 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 PPP1R2P41236 205 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 STX17P56962 302 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 LRMPQ12912 555 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 DHCR24Q15392 516 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 GAB4Q2WGN9 574 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 TTI2Q6NXR4 508 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 PRR23BQ6ZRT6 265 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 ADGRG2Q8IZP9 1017 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 TMEM176AQ96HP8 235 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 FAXDC2Q96IV6 333 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 CEP63Q96MT8 703 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 DUSP16Q9BY84 665 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 RAB23Q9ULC3 237 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 SCML2Q9UQR0 700 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 COQ4Q9Y3A0 265 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 SH3BP1Q9Y3L3 701 aa23.29■■□□□ 1.32
SYNGR3-206ENST00000618464 TBX18O95935 607 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 OPRD1P41143 372 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 PXNP49023 591 aaPredicted RBP23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 SPEM2Q0P670 501 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 CUL2Q13617 745 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 LONP2Q86WA8 852 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 TTC39CQ8N584 583 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 RPLP0P6Q8NHW5 317 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 WBP2Q969T9 261 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 METTL14Q9HCE5 456 aaKnown RBP23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 OSER1Q9NX31 292 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 SLC8A2Q9UPR5 921 aa23.28■■□□□ 1.32
SYNGR3-206ENST00000618464 A0A1W2PQH9 124 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 E2F8A0AVK6 867 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 ATG13O75143 517 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 FMO5P49326 533 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 ATXN1P54253 815 aaKnown RBP23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 SIM2Q14190 667 aaPredicted RBP23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 FBXO43Q4G163 708 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 LAIR1Q6GTX8 287 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 KIAA1958Q8N8K9 716 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 NMUR1Q9HB89 426 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 PNPLA8Q9NP80 782 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 TBC1D14Q9P2M4 693 aa23.27■■□□□ 1.32
SYNGR3-206ENST00000618464 BICDL2A1A5D9 508 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 KIF11P52732 1056 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 SEC13P55735 322 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 LMNB2Q03252 620 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 RHBDF2Q6PJF5 856 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 BBS7Q8IWZ6 715 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 HHIPQ96QV1 700 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 CHMP5Q9NZZ3 219 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 NUDT5Q9UKK9 219 aa23.26■■□□□ 1.31
SYNGR3-206ENST00000618464 PRR5-ARHGAP8B1AHC4 643 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 MDM4O15151 490 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 ADH1CP00326 375 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 ADH5P11766 374 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 SLC6A11P48066 632 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 UBE2HP62256 183 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 ARHGAP8P85298 464 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 PAK1Q13153 545 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 CAMK4Q16566 473 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 LY6G5CQ5SRR4 150 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 C12orf40Q86WS4 652 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 CYLDQ9NQC7 956 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 NAGPAQ9UK23 515 aa23.25■■□□□ 1.31
SYNGR3-206ENST00000618464 ANTXRLA6NF34 631 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 RETP07949 1114 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 RARGP13631 454 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 ATP5C1P36542 298 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 GOLGA7BQ2TAP0 167 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 ARHGAP17Q68EM7 881 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 WDR5BQ86VZ2 330 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 SFTPA1Q8IWL2 248 aa23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 KLF16Q9BXK1 252 aaPredicted RBP23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 CDV3Q9UKY7 258 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.24■■□□□ 1.31
SYNGR3-206ENST00000618464 MYOFQ9NZM1 2061 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 K7EQS6 105 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 CD19P15391 556 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 SDHBP21912 280 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 HOXA6P31267 233 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 CNR2P34972 360 aa23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 YWHAEP62258 255 aaKnown RBP23.23■■□□□ 1.31
SYNGR3-206ENST00000618464 KDSRQ06136 332 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms