RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 IZUMO3Q5VZ72 239 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 ZNF365Q70YC5 407 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 GSTA5Q7RTV2 222 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 FUKQ8N0W3 1084 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 C11orf84Q9BUA3 381 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 FAM129AQ9BZQ8 928 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 TSPYL2Q9H2G4 693 aaPredicted RBP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 SNX25Q9H3E2 840 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 GPATCH2LQ9NWQ4 482 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 PCDH10Q9P2E7 1040 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 HESX1Q9UBX0 185 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 NOVA2Q9UNW9 492 aaKnown RBP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 DPYSL4O14531 572 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 CYB561D2O14569 222 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 GABRDO14764 452 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 WARSP23381 471 aaKnown RBP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 NRLP54845 237 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 HDAC4P56524 1084 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 SLMAPQ14BN4 828 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 ZC3H12AQ5D1E8 599 aaKnown RBP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 DENND2CQ68D51 928 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 NPNTQ6UXI9 565 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 CCDC89Q8N998 374 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 CHST12Q9NRB3 414 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.3■□□□□ 0.52
CNOT3-209ENST00000617930 SCN5AQ14524 2016 aa18.3■□□□□ 0.52
CNOT3-209ENST00000617930 ARL5CA6NH57 179 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 XPOTO43592 962 aaKnown RBP18.29■□□□□ 0.52
CNOT3-209ENST00000617930 ITGAVP06756 1048 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 LCP1P13796 627 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 IBSPP21815 317 aaPredicted RBP18.29■□□□□ 0.52
CNOT3-209ENST00000617930 RABGGTBP53611 331 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 BST2Q10589 180 aaKnown RBP18.29■□□□□ 0.52
CNOT3-209ENST00000617930 DPYSL3Q14195 570 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 MRPL10Q7Z7H8 261 aaKnown RBP18.29■□□□□ 0.52
CNOT3-209ENST00000617930 TOP6BLQ8N6T0 577 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 B3GALNT2Q8NCR0 500 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 DIS3LQ8TF46 1054 aaKnown RBP18.29■□□□□ 0.52
CNOT3-209ENST00000617930 FAM172AQ8WUF8 416 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 TLCD1Q96CP7 247 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 ADAM2Q99965 735 aa18.29■□□□□ 0.52
CNOT3-209ENST00000617930 HUS1O60921 280 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 SCNN1GP51170 649 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 EIF3BP55884 814 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 EPS8L3Q8TE67 593 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 CALN1Q9BXU9 219 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 SLC12A6Q9UHW9 1150 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 TIMM13Q9Y5L4 95 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 NBNO60934 754 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 RPLP2P05387 115 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 HSPA8P11142 646 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 BCAT1P54687 386 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 MAGOHP61326 146 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 IFI35P80217 286 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 KYNUQ16719 465 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 RNF187Q5TA31 235 aaPredicted RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 HOOK3Q86VS8 718 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 UNC45BQ8IWX7 931 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 NGRNQ9NPE2 291 aaKnown RBP18.28■□□□□ 0.52
CNOT3-209ENST00000617930 CRTAC1Q9NQ79 661 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
CNOT3-209ENST00000617930 DNALI1O14645 258 aaPredicted RBP18.27■□□□□ 0.52
CNOT3-209ENST00000617930 ACSL3O95573 720 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 CDH6P55285 790 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 PLCB3Q01970 1234 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 GAD2Q05329 585 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 GPS1Q13098 491 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 PIGZQ86VD9 579 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 RFX6Q8HWS3 928 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 ZNF333Q96JL9 665 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 SENP8Q96LD8 212 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 HNRNPABQ99729 332 aaKnown RBP18.27■□□□□ 0.52
CNOT3-209ENST00000617930 CAPN7Q9Y6W3 813 aa18.27■□□□□ 0.52
CNOT3-209ENST00000617930 GMNCA6NCL1 334 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 H0YHG0 523 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 THP07101 528 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 PTPN1P18031 435 aaKnown RBP18.27■□□□□ 0.51
CNOT3-209ENST00000617930 SLCO1A2P46721 670 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 NDUFV1P49821 464 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 ADCY1Q08828 1119 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 SCYL2Q6P3W7 929 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 CD300LGQ6UXG3 332 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 TRMT10CQ7L0Y3 403 aaKnown RBP18.27■□□□□ 0.51
CNOT3-209ENST00000617930 SLC26A9Q7LBE3 791 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 ZNF598Q86UK7 904 aaKnown RBP18.27■□□□□ 0.51
CNOT3-209ENST00000617930 PQLC3Q8N755 202 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 CENPIQ92674 756 aaPredicted RBP18.27■□□□□ 0.51
CNOT3-209ENST00000617930 CRISPLD2Q9H0B8 497 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 NINJ2Q9NZG7 142 aa18.27■□□□□ 0.51
CNOT3-209ENST00000617930 A0A0U1RQF3 1178 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 TLDC2A0PJX2 215 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 CASTOR2A6NHX0 329 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 SMIM23A6NLE4 172 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 PRPSAP2O60256 369 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 B4GALT3O60512 393 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 ZNF623O75123 536 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 TTC4O95801 387 aa18.26■□□□□ 0.51
CNOT3-209ENST00000617930 SDC4P31431 198 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms