RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PCED1BQ96HM7 432 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 FUBP3Q96I24 572 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 B3GNT5Q9BYG0 378 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 RAB17Q9H0T7 212 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 NSUN3Q9H649 340 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 ARFGAP3Q9NP61 516 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 CRTAC1Q9NQ79 661 aa17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 RBM12Q9NTZ6 932 aaKnown RBP17.56■□□□□ 0.4
TRAPPC3-210ENST00000617904 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.56■□□□□ 0.41e-21■■□□□ 14.2
TRAPPC3-210ENST00000617904 ATG2AQ2TAZ0 1938 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 H3BQ06 376 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 I3L4J1 428 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CAPN9O14815 690 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 GPR37L1O60883 481 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 RB1P06400 928 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 GBP1P32455 592 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CTNNB1P35222 781 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 GJC1P36383 396 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 PLA2G5P39877 138 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 PTPN9P43378 593 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 LMNB2Q03252 620 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZNF211Q13398 564 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CTXN3Q4LDR2 81 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 BOLA3Q53S33 107 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 LLGL2Q6P1M3 1020 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CLEC20AQ6ZU45 233 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CEP57Q86XR8 500 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 GJD3Q8N144 294 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 NOA1Q8NC60 698 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 LRRN4CLQ8ND94 238 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 JOSD2Q8TAC2 188 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 C2orf15Q8WU43 125 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 IRGQQ8WZA9 623 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CLP1Q92989 425 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM149B1Q96BN6 582 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 PABPC5Q96DU9 382 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 TBCBQ99426 244 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 KRT12Q99456 494 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 PARD6BQ9BYG5 372 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 AAASQ9NRG9 546 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 CACNG4Q9UBN1 327 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 TMEM59LQ9UK28 342 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 UTP11Q9Y3A2 253 aaKnown RBP17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 NME7Q9Y5B8 376 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 MYO7AQ13402 2215 aa17.55■□□□□ 0.4
TRAPPC3-210ENST00000617904 MYBPHLA2RUH7 354 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM187AA6NFU0 413 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 C2CD4BA6NLJ0 364 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 GRM6O15303 877 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 PAPSS1O43252 624 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 PHF2O75151 1096 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 PYGMP11217 842 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 RDXP35241 583 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 TKTL1P51854 596 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 YWHAZP63104 245 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 ADIGQ0VDE8 80 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 PUS10Q3MIT2 529 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 FAM171A1Q5VUB5 890 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 VSTM1Q6UX27 236 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 KLHL7Q8IXQ5 586 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 CRIPAKQ8N1N5 446 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 TTC13Q8NBP0 860 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 MAK16Q9BXY0 300 aaKnown RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 FRMD8P1Q9BZ68 369 aaPredicted RBP17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 TRIM7Q9C029 511 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 CSNK1G1Q9HCP0 422 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 STIM2Q9P246 746 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 DNAJB4Q9UDY4 337 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 EFR3BQ9Y2G0 817 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 PCDHB5Q9Y5E4 795 aa17.54■□□□□ 0.4
TRAPPC3-210ENST00000617904 F8VP50 259 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 CLDN5O00501 218 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 FSCN2O14926 492 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 TRIM66O15016 1216 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 DAB1O75553 588 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 DGKIO75912 1065 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 GJB6O95452 261 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 LAG3P18627 525 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 PTPN7P35236 360 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 FNTAP49354 379 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 PDK2Q15119 407 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 FUT10Q6P4F1 479 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 SND1Q7KZF4 910 aaKnown RBP eCLIP17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 STRADAQ7RTN6 431 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 SCML4Q8N228 414 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 EMC1Q8N766 993 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 KCTD6Q8NC69 237 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 TSC1Q92574 1164 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 MAGOHBQ96A72 148 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 ZNF558Q96NG5 402 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 C11orf84Q9BUA3 381 aaPredicted RBP17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 AP1M1Q9BXS5 423 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 OSBPL8Q9BZF1 889 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 LMAN2LQ9H0V9 348 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 ACBD3Q9H3P7 528 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 NGRNQ9NPE2 291 aaKnown RBP17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 EHD2Q9NZN4 543 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 RAB21Q9UL25 225 aa17.53■□□□□ 0.4
TRAPPC3-210ENST00000617904 USP18Q9UMW8 372 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms