RNA–Protein interactions for RNA: ENST00000617799.1

SBDS-205, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SBDS, Length 953 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-205ENST00000617799 RPP25Q9BUL9 199 aaKnown RBP18.05■□□□□ 0.48
SBDS-205ENST00000617799 MIS12Q9H081 205 aa18.05■□□□□ 0.48
SBDS-205ENST00000617799 AIPL1Q9NZN9 384 aa18.05■□□□□ 0.48
SBDS-205ENST00000617799 PCDHGC3Q9UN70 934 aa18.05■□□□□ 0.48
SBDS-205ENST00000617799 ANAPC1Q9H1A4 1944 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 HEPACAM2A8MVW5 462 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 DCXO43602 365 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 GYPCP04921 128 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 MBL2P11226 248 aaPredicted RBP18.04■□□□□ 0.48
SBDS-205ENST00000617799 RALAP11233 206 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 SNX16P57768 344 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 ARID5BQ14865 1188 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 TMC6Q7Z403 805 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 VPS36Q86VN1 386 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 SLC44A3Q8N4M1 653 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 CELF5Q8N6W0 485 aaKnown RBP18.04■□□□□ 0.48
SBDS-205ENST00000617799 C1orf131Q8NDD1 294 aaKnown RBP18.04■□□□□ 0.48
SBDS-205ENST00000617799 OR8K1Q8NGG5 319 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 BAP1Q92560 729 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 GOLGA1Q92805 767 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 HSFY1Q96LI6 401 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 SMOC2Q9H3U7 446 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 SYNCQ9H7C4 482 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 CCSER2Q9H7U1 834 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 KIF9Q9HAQ2 790 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 TRPV4Q9HBA0 871 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 CNGB3Q9NQW8 809 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 TDP1Q9NUW8 608 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 SMPD4Q9NXE4 827 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 USP3Q9Y6I4 520 aa18.04■□□□□ 0.48
SBDS-205ENST00000617799 BDP1A6H8Y1 2624 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 LRRC53A6NM62 1247 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 AKR1B15C9JRZ8 316 aaPredicted RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 AP5Z1O43299 807 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 TLR5O60602 858 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 OAS1P00973 400 aaKnown RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 ZDHHC11BP0C7U3 371 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 ALADP13716 330 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 PFKLP17858 780 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 HNRNPH3P31942 346 aaKnown RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 ACADSBP45954 432 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 PSEN1P49768 467 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 TUBP50607 506 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 GSDMDP57764 484 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 YWHAGP61981 247 aaKnown RBP eCLIP18.03■□□□□ 0.48
SBDS-205ENST00000617799 PDCLQ13371 301 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 ASIC2Q16515 512 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 SNX30Q5VWJ9 437 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 VITQ6UXI7 678 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 TRIM72Q6ZMU5 477 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 RSRC2Q7L4I2 434 aaKnown RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 TADA2BQ86TJ2 420 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 UBALD2Q8IYN6 164 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 TMEM35BQ8NCS4 154 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 STK32AQ8WU08 396 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 SLC20A1Q8WUM9 679 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 CPLX3Q8WVH0 158 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 NDRG1Q92597 394 aaKnown RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 USP13Q92995 863 aaPredicted RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 PLA2G2FQ9BZM2 168 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 LHX5Q9H2C1 402 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 SEPT11Q9NVA2 429 aaKnown RBP18.03■□□□□ 0.48
SBDS-205ENST00000617799 CCL26Q9Y258 94 aa18.03■□□□□ 0.48
SBDS-205ENST00000617799 FAM170AA1A519 330 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 COCHO43405 550 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 NARSO43776 548 aaKnown RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 FBXO21O94952 628 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 MMEP08473 750 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 RARGP13631 454 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 PSMC3P17980 439 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 WEE1P30291 646 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 PRKCIP41743 596 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 PGFP49763 221 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 CDR2Q01850 454 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 TBX2Q13207 712 aaPredicted RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 C10orf120Q5SQS8 335 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 CC2D1AQ6P1N0 951 aaPredicted RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 BPIFB1Q8TDL5 484 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 IPO4Q8TEX9 1081 aaKnown RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 DEPDC1BQ8WUY9 529 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 KHSRPQ92945 711 aaKnown RBP eCLIP18.02■□□□□ 0.48
SBDS-205ENST00000617799 RSPRY1Q96DX4 576 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 PPP1R13BQ96KQ4 1090 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 DNAJC7Q99615 494 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 TRMT61BQ9BVS5 477 aaKnown RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 BRD9Q9H8M2 597 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 NMUR1Q9HB89 426 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 CYTH4Q9UIA0 394 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 NOCTQ9UK39 431 aaKnown RBP18.02■□□□□ 0.48
SBDS-205ENST00000617799 DUSP12Q9UNI6 340 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 CPQQ9Y646 472 aa18.02■□□□□ 0.48
SBDS-205ENST00000617799 HELZP42694 1942 aaKnown RBP18.02■□□□□ 0.47
SBDS-205ENST00000617799 E5RJQ4 531 aa18.01■□□□□ 0.47
SBDS-205ENST00000617799 SART1O43290 800 aaKnown RBP18.01■□□□□ 0.47
SBDS-205ENST00000617799 MFAP3LO75121 409 aa18.01■□□□□ 0.47
SBDS-205ENST00000617799 LSM8O95777 96 aaKnown RBP18.01■□□□□ 0.47
SBDS-205ENST00000617799 SRFP11831 508 aa18.01■□□□□ 0.47
SBDS-205ENST00000617799 GDI1P31150 447 aa18.01■□□□□ 0.47
SBDS-205ENST00000617799 CASP14P31944 242 aa18.01■□□□□ 0.47
SBDS-205ENST00000617799 ATP5C1P36542 298 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms