RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 IRS1P35568 1242 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 HFE2Q6ZVN8 426 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 MICAL1Q8TDZ2 1067 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 USTQ9Y2C2 406 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 GBF1Q92538 1859 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 H3BQF6 201 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 HAPLN1P10915 354 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 GSCP56915 257 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 USP46P62068 366 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 MTMR3Q13615 1198 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 CAMK1Q14012 370 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 BEND6Q5SZJ8 279 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 VSTM1Q6UX27 236 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 SLFN11Q7Z7L1 901 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 ZNF461Q8TAF7 563 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 SPPL2BQ8TCT7 592 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 GIPC2Q8TF65 315 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 FAM149B1Q96BN6 582 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 TGS1Q96RS0 853 aaKnown RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 NAPGQ99747 312 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 OXCT2Q9BYC2 517 aaPredicted RBP17.06■□□□□ 0.32
SNAP47-213ENST00000617596 TMEM59LQ9UK28 342 aa17.06■□□□□ 0.32
SNAP47-213ENST00000617596 CTAGE9A4FU28 777 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 YJEFN3A6XGL0 299 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 E7ENQ6 273 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 SRGAP2O75044 1071 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 ABLIM3O94929 683 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 ATF6P18850 670 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 MRPS5P82675 430 aaKnown RBP17.05■□□□□ 0.32
SNAP47-213ENST00000617596 RAB6CQ53S08 254 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 SH3PXD2AQ5TCZ1 1133 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 PEX26Q7Z412 305 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 NT5DC3Q86UY8 548 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 CFAP57Q96MR6 1250 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 PLVAPQ9BX97 442 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 TLR10Q9BXR5 811 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 RAB6CQ9H0N0 254 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 CYP4F11Q9HBI6 524 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 ABCB6Q9NP58 842 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 CYLDQ9NQC7 956 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 TLR9Q9NR96 1032 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 RWDD3Q9Y3V2 267 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 PTPRDP23468 1912 aa17.05■□□□□ 0.32
SNAP47-213ENST00000617596 C5orf67F2Z3F1 127 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 ZBED1O96006 694 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 ATF2P15336 505 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 TCF4P15884 667 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 CXCR5P32302 372 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 MAGEA11P43364 429 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 PGFP49763 221 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 SNX16P57768 344 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 RAB33AQ14088 237 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 MEI1Q5TIA1 1274 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 RXFP2Q8WXD0 754 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 C11orf84Q9BUA3 381 aaPredicted RBP17.04■□□□□ 0.32
SNAP47-213ENST00000617596 VIPAS39Q9H9C1 493 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 AFF4Q9UHB7 1163 aaKnown RBP17.04■□□□□ 0.32
SNAP47-213ENST00000617596 MYO7AQ13402 2215 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 TFE3P19532 575 aaPredicted RBP17.04■□□□□ 0.32
SNAP47-213ENST00000617596 PSMA2P25787 234 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 MARCKSL1P49006 195 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 DAOAP59103 153 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 CDO1Q16878 200 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 C15orf59Q2T9L4 293 aaPredicted RBP17.04■□□□□ 0.32
SNAP47-213ENST00000617596 C11orf63Q6NUN7 778 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 SLC26A9Q7LBE3 791 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 BHLHA9Q7RTU4 235 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 ZDHHC17Q8IUH5 632 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 SYCE1Q8N0S2 351 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 ARNTL2Q8WYA1 636 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 C8orf48Q96LL4 319 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
SNAP47-213ENST00000617596 SZT2Q5T011 3432 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 C2CD4BA6NLJ0 364 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 TGM5O43548 720 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 SPOPO43791 374 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 PROSCO94903 275 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 PDGFRAP16234 1089 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 ERVK-21P61565 698 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 ATP11AP98196 1134 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 SMARCB1Q12824 385 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 PPP2R2DQ66LE6 453 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 CHRDL2Q6WN34 429 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 MRPL43Q8N983 215 aaKnown RBP17.03■□□□□ 0.32
SNAP47-213ENST00000617596 KRT35Q92764 455 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 KLHL5Q96PQ7 755 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 ADAM33Q9BZ11 813 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 PNPLA8Q9NP80 782 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 CNGB3Q9NQW8 809 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNAP47-213ENST00000617596 FNIP2Q9P278 1114 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 IP6K2Q9UHH9 426 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 AMFRQ9UKV5 643 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 LZTS1Q9Y250 596 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 USP3Q9Y6I4 520 aa17.03■□□□□ 0.32
SNAP47-213ENST00000617596 C2orf71A6NGG8 1288 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms