RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 EZH1Q92800 747 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 EPAS1Q99814 870 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 LRRC19Q9H756 370 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 AVENQ9NQS1 362 aaPredicted RBP15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 HESX1Q9UBX0 185 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 KCNH4Q9UQ05 1017 aa15.09■□□□□ 0.01
SHROOM1-208ENST00000617339 YWHAEP62258 255 aaKnown RBP15.08■□□□□ 0
SHROOM1-208ENST00000617339 TRIM72Q6ZMU5 477 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 PHF13Q86YI8 300 aaPredicted RBP15.08■□□□□ 0
SHROOM1-208ENST00000617339 SPATA18Q8TC71 538 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 LRRC8CQ8TDW0 803 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 ART4Q93070 314 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 C16orf70Q9BSU1 422 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 TNFSF13BQ9Y275 285 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 ABLIM1O14639 778 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 NVLO15381 856 aaKnown RBP15.08■□□□□ 0
SHROOM1-208ENST00000617339 SERPINB4P48594 390 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 ZC3H15Q8WU90 426 aaKnown RBP15.08■□□□□ 0
SHROOM1-208ENST00000617339 VCXQ9H320 206 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 DENND2DQ9H6A0 471 aaPredicted RBP15.08■□□□□ 0
SHROOM1-208ENST00000617339 TMPRSS4Q9NRS4 437 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 NINJ2Q9NZG7 142 aa15.08■□□□□ 0
SHROOM1-208ENST00000617339 CLDN5O00501 218 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 PMM2O15305 246 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 TSPAN1O60635 241 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 ZCCHC18P0CG32 403 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 MAGEA4P43358 317 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 CLDN10P78369 228 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 HADHQ16836 314 aaKnown RBP15.07■□□□□ 0
SHROOM1-208ENST00000617339 PMF1Q6P1K2 205 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 CCNJLQ8IV13 435 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 UNC45BQ8IWX7 931 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 MORC4Q8TE76 937 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 GRK7Q8WTQ7 553 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 MAML3Q96JK9 1138 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 TRIM56Q9BRZ2 755 aaKnown RBP15.07■□□□□ 0
SHROOM1-208ENST00000617339 ZFYVE28Q9HCC9 887 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 DOCK3Q8IZD9 2030 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 RASA4BC9J798 803 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 RASA4O43374 803 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 PIGRP01833 764 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 RBP3P10745 1247 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 YY1P25490 414 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 HADHBP55084 474 aaKnown RBP15.07■□□□□ 0
SHROOM1-208ENST00000617339 EFTUD2Q15029 972 aaKnown RBP eCLIP15.07■□□□□ 06e-7■■■■■ 33.2
SHROOM1-208ENST00000617339 ANKRD22Q5VYY1 191 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 CTAGE3PQ8IX95 158 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 ARFGAP1Q8N6T3 406 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 TMEM40Q8WWA1 233 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 LPPQ93052 612 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 RNF34Q969K3 372 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 GCOM2Q9BZD3 368 aaPredicted RBP15.07■□□□□ 0
SHROOM1-208ENST00000617339 PRM3Q9NNZ6 103 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 NMRK1Q9NWW6 199 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 SEPT10Q9P0V9 454 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 SCOCQ9UIL1 159 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 DCTN4Q9UJW0 460 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 CHKBQ9Y259 395 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 LRRC42Q9Y546 428 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 PRPSAP2O60256 369 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 RECQL4O94761 1208 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 P4HA1P13674 534 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 AFF1P51825 1210 aaKnown RBP15.07■□□□□ 0
SHROOM1-208ENST00000617339 GALNT15Q8N3T1 639 aa15.07■□□□□ 0
SHROOM1-208ENST00000617339 TCRBV7S3A2A0A539 114 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 MTA2O94776 668 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 ITIH2P19823 946 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 EIF3EP60228 445 aaKnown RBP15.06■□□□□ 0
SHROOM1-208ENST00000617339 RCN1Q15293 331 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 TFDP3Q5H9I0 405 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 RCOR2Q8IZ40 523 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 EXD1Q8NHP7 514 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 TRAIPQ9BWF2 469 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 DHX35Q9H5Z1 703 aaKnown RBP15.06■□□□□ 0
SHROOM1-208ENST00000617339 USP18Q9UMW8 372 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 CHMP2BQ9UQN3 213 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 TAC1P20366 129 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 FAM183BPQ6ZVS7 135 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 TLK2Q86UE8 772 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 RUNDC3BQ96NL0 473 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 NT5C1AQ9BXI3 368 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 PTPRHQ9HD43 1115 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 PRKAG3Q9UGI9 489 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 NAALADL1Q9UQQ1 740 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 MED7O43513 233 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 RBP5P82980 135 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 NME3Q13232 169 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 CUL3Q13618 768 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 KHDC1Q4VXA5 237 aaKnown RBP15.06■□□□□ 0
SHROOM1-208ENST00000617339 PPP1R21Q6ZMI0 780 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 ARHGEF18Q6ZSZ5 1173 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 CROCCP2Q86T23 111 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 RBM41Q96IZ5 413 aaKnown RBP15.06■□□□□ 0
SHROOM1-208ENST00000617339 BEGAINQ9BUH8 593 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 WDR35Q9P2L0 1181 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 PHTF1Q9UMS5 762 aa15.06■□□□□ 0
SHROOM1-208ENST00000617339 ZNFX1Q9P2E3 1918 aaKnown RBP15.05■□□□□ 0
SHROOM1-208ENST00000617339 hCG_2014768A0A024R1R8 64 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 IGKV6-21A0A0C4DH24 114 aa15.05■□□□□ 0
SHROOM1-208ENST00000617339 E2F8A0AVK6 867 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms