RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 ATP5C1P36542 298 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 PPP1R2P41236 205 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 GRIA2P42262 883 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 TNFRSF4P43489 277 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 MXI1P50539 228 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SLC8A3P57103 927 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 GAD2Q05329 585 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 LRRC63Q05C16 580 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SPEM2Q0P670 501 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SRSF5Q13243 272 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 STIM1Q13586 685 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 DMC1Q14565 340 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 PKN3Q6P5Z2 889 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 KLHDC10Q6PID8 442 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 CLEC20AQ6ZU45 233 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 HTR3DQ70Z44 454 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 C11orf74Q86VG3 221 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 ZNF276Q8N554 614 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 ENGASEQ8NFI3 743 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SPATA20Q8TB22 786 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 KCNV2Q8TDN2 545 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 USP33Q8TEY7 942 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SMARCE1Q969G3 411 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 ZC3H10Q96K80 434 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 HEXIM2Q96MH2 286 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 CDK5RAP1Q96SZ6 601 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 RTKNQ9BST9 563 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 DUSP16Q9BY84 665 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 UBXN6Q9BZV1 441 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 CCSER2Q9H7U1 834 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 MMRN2Q9H8L6 949 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 CYLDQ9NQC7 956 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SEMA4GQ9NTN9 838 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 FAM49BQ9NUQ9 324 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 HMGXB4Q9UGU5 601 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
TARDBP-218ENST00000617172 SPTBN4Q9H254 2564 aa10.22□□□□□ -0.77
TARDBP-218ENST00000617172 PSMA7O14818 248 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 KAT7O95251 611 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 ADH5P11766 374 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 CD58P19256 250 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 ACO1P21399 889 aaKnown RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 ADORA2BP29275 332 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 PLA2G4AP47712 749 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 PXNP49023 591 aaPredicted RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 DGKEP52429 567 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 ORC1Q13415 861 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 GAB4Q2WGN9 574 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 USP39Q53GS9 565 aaKnown RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 NAIF1Q69YI7 327 aaPredicted RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 SMYD4Q8IYR2 804 aaPredicted RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 TSTD1Q8NFU3 115 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 NETO1Q8TDF5 533 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 TWNKQ96RR1 684 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 METTL14Q9HCE5 456 aaKnown RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 PARD6AQ9NPB6 346 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.21□□□□□ -0.771e-9■■■■□ 21.2
TARDBP-218ENST00000617172 SPHK2Q9NRA0 654 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 ARMCX3Q9UH62 379 aaPredicted RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 DNMT3LQ9UJW3 386 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 LSM7Q9UK45 103 aaKnown RBP10.21□□□□□ -0.77
TARDBP-218ENST00000617172 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 COQ4Q9Y3A0 265 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 PCDHGA5Q9Y5G8 931 aa10.21□□□□□ -0.77
TARDBP-218ENST00000617172 DMXL1Q9Y485 3027 aa10.21□□□□□ -0.78
TARDBP-218ENST00000617172 HHLA1C9JL84 531 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 HOXC11O43248 304 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ALDH1A2O94788 518 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 RHOBTB1O94844 696 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ZNF806P0C7X5 589 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 RALAP11233 206 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 KIF11P52732 1056 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ATXN1P54253 815 aaKnown RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 YWHAEP62258 255 aaKnown RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ELF2Q15723 593 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 CRY1Q16526 586 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 C2orf27AQ580R0 203 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 EOGTQ5NDL2 527 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 LY6G5CQ5SRR4 150 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 PPP1R26Q5T8A7 1209 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 TCERG1LQ5VWI1 586 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 DENND4CQ5VZ89 1909 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ANKRD40Q6AI12 368 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 PRR23CQ6ZRP0 262 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 CCDC186Q7Z3E2 898 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 BBS7Q8IWZ6 715 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ZC3H3Q8IXZ2 948 aaKnown RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ARHGAP18Q8N392 663 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 WHAMMQ8TF30 809 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 SEMA4DQ92854 862 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 EEF2KMTQ96G04 330 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 TMEM176AQ96HP8 235 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 DHTKD1Q96HY7 919 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 HHIPQ96QV1 700 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 KLF16Q9BXK1 252 aaPredicted RBP10.2□□□□□ -0.78
TARDBP-218ENST00000617172 ARHGEF4Q9NR80 690 aa10.2□□□□□ -0.78
TARDBP-218ENST00000617172 CISHQ9NSE2 258 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms