RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 AIM2O14862 343 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 NDUFB5O43674 189 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 RFC1P35251 1148 aaPredicted RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 STX3Q13277 289 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 GPAT2Q6NUI2 795 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 TMEM161BQ8NDZ6 487 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 TMEM143Q96AN5 459 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 OLFM3Q96PB7 478 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 SCINQ9Y6U3 715 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 NEMP1O14524 444 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 ITM2AO43736 263 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 STAM2O75886 525 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 BBOX1O75936 387 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 GTF2BQ00403 316 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 FOLH1Q04609 750 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 ZNF252P-AS1Q0IIN9 211 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 HSF5Q4G112 596 aaPredicted RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 PPP1R2P3Q6NXS1 205 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 NET1Q7Z628 596 aaPredicted RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 OR5B17Q8NGF7 314 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 EHMT1Q9H9B1 1298 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 S100A14Q9HCY8 104 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 AVENQ9NQS1 362 aaPredicted RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 ZC3H7BQ9UGR2 993 aaKnown RBP13.68□□□□□ -0.22
MSH6-214ENST00000616033 INPP5FQ9Y2H2 1132 aa13.68□□□□□ -0.22
MSH6-214ENST00000616033 E9PBE3 544 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 XPO1O14980 1071 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 KLHL41O60662 606 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 CUL2Q13617 745 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 RNF111Q6ZNA4 994 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 JOSD2Q8TAC2 188 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 GSDMBQ8TAX9 411 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 GPATCH2LQ9NWQ4 482 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 PLIN4Q96Q06 1357 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 CLPTM1O96005 669 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 KRT19P08727 400 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 ABCG1P45844 678 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 PPP2R5DQ14738 602 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 OASLQ15646 514 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 TMCO4Q5TGY1 634 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 DPY19L2Q6NUT2 758 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 APLFQ8IW19 511 aaPredicted RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSH6-214ENST00000616033 ADAM32Q8TC27 787 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 ZNF398Q8TD17 642 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 USP13Q92995 863 aaPredicted RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 PAIP2BQ9ULR5 123 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 SOX13Q9UN79 622 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 APOBEC2Q9Y235 224 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 A0A0B4J269 797 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 MCF2LO15068 1137 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 SLC26A4O43511 780 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 DCXO43602 365 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 DKC1O60832 514 aaKnown RBP eCLIP13.67□□□□□ -0.22
MSH6-214ENST00000616033 ITGA2BP08514 1039 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 IL1R2P27930 398 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 CDKN2BP42772 138 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 PDK1Q15118 436 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 TCEAL1Q15170 157 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 CNGA3Q16281 694 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 GSTA3Q16772 222 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 AOC3Q16853 763 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 ATG16L1Q676U5 607 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 TRMT10BQ6PF06 316 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 PNPOQ9NVS9 261 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 ZNRF3Q9ULT6 936 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 PLA2G4CQ9UP65 541 aa13.67□□□□□ -0.22
MSH6-214ENST00000616033 MRPL11Q9Y3B7 192 aaKnown RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
MSH6-214ENST00000616033 KCNN4O15554 427 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 KRT37O76014 449 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 ALOX15P16050 662 aaPredicted RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 RAB6CQ53S08 254 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 RAB6CQ9H0N0 254 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 RAVER2Q9HCJ3 691 aaKnown RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 UBAP1Q9NZ09 502 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 KIF13BQ9NQT8 1826 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 TAF1LQ8IZX4 1826 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 FOXD2O60548 495 aaPredicted RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 UQCRBP14927 111 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 SAT1P21673 171 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 SERPINB5P36952 375 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 MRPS22P82650 360 aaKnown RBP13.66□□□□□ -0.22
MSH6-214ENST00000616033 LSAMPQ13449 338 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 DNAL1Q4LDG9 190 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 CMPK2Q5EBM0 449 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
MSH6-214ENST00000616033 ALKBH8Q96BT7 664 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms