RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 CFAP57Q96MR6 1250 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 PCDHB18PQ96TA0 734 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 CDCA3Q99618 268 aaPredicted RBP11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 NUP85Q9BW27 656 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 PITPNM3Q9BZ71 974 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 SEPT11Q9NVA2 429 aaKnown RBP11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 LARSQ9P2J5 1176 aaKnown RBP11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 LNPEPQ9UIQ6 1025 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 ANAPC5Q9UJX4 755 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 NAALADL1Q9UQQ1 740 aa11.61□□□□□ -0.55
RABGAP1-213ENST00000616002 SMIM23A6NLE4 172 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 TBKBP1A7MCY6 615 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ANKRD63C9JTQ0 380 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 THAP12O43422 761 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ZC3H11AO75152 810 aaKnown RBP eCLIP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ASMTLO95671 621 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ATF2P15336 505 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 SLC26A2P50443 739 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 CYP2J2P51589 502 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 GPC3P51654 580 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ZC2HC1CQ53FD0 456 aaPredicted RBP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 PDE12Q6L8Q7 609 aaKnown RBP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 CGB2Q6NT52 195 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 DRICH1Q6PGQ1 229 aaPredicted RBP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 MTHFD1LQ6UB35 978 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ZBTB33Q86T24 672 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ECHDC2Q86YB7 292 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 XXYLT1Q8NBI6 393 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 PIGOQ8TEQ8 1089 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 SPDL1Q96EA4 605 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 NAF1Q96HR8 494 aaKnown RBP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 DYDC2Q96IM9 177 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 RIT2Q99578 217 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 ADAM2Q99965 735 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 MXRA8Q9BRK3 442 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 DCLK3Q9C098 648 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 CCDC113Q9H0I3 377 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 IRF2BPLQ9H1B7 796 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 KCNK9Q9NPC2 374 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 C1orf112Q9NSG2 853 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 NINJ2Q9NZG7 142 aa11.6□□□□□ -0.55
RABGAP1-213ENST00000616002 AHCYL1O43865 530 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 LYPLA2O95372 231 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 TRIM49P0CI25 452 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 TRIM49CP0CI26 452 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ATP6V1C1P21283 382 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 GTF2BQ00403 316 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 FMO1Q01740 532 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 CYP4A11Q02928 519 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 MPP2Q14168 576 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SPARCL1Q14515 664 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 DUSP6Q16828 381 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SLC45A4Q5BKX6 768 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 AADACL2Q6P093 401 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SLC24A5Q71RS6 500 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 NIPA1Q7RTP0 329 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 USP37Q86T82 979 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ERICH1Q86X53 443 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ARHGEF19Q8IW93 802 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SYCP3Q8IZU3 236 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ZCCHC9Q8N567 271 aaKnown RBP11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 VN1R2Q8NFZ6 395 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 TMC2Q8TDI7 906 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SUSD6Q92537 303 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 LRRC37BQ96QE4 947 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 SH3GL3Q99963 347 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 DDX23Q9BUQ8 820 aaKnown RBP11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 RGL1Q9NZL6 768 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ZFATQ9P243 1243 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 ASIC3Q9UHC3 531 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 NFASCO94856 1347 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 MYH11P35749 1972 aa11.59□□□□□ -0.55
RABGAP1-213ENST00000616002 TCRBV7S2A1N4TA0A589 114 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 GPR182O15218 404 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 PSTPIP1O43586 416 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 MGEA5O60502 916 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 GFRA3O60609 400 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 NPTXRO95502 500 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 ACSL3O95573 720 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 FESP07332 822 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 ACADSP16219 412 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 AVPR2P30518 371 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 ITGA8P53708 1063 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 VCPP55072 806 aaKnown RBP11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 ERVFC1P60507 584 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 FOXK1P85037 733 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 MGAT5Q09328 741 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 PDK4Q16654 411 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 TUSC1Q2TAM9 212 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 C1orf220Q5T0J3 134 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 FAM102BQ5T8I3 360 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 TRABD2AQ86V40 505 aa11.58□□□□□ -0.55
RABGAP1-213ENST00000616002 CCDC25Q86WR0 208 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms