RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 CHRNA3P32297 505 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 PLTPP55058 493 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 WNT7BP56706 349 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 EPC2Q52LR7 807 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 LMBRD2Q68DH5 695 aaPredicted RBP13.65□□□□□ -0.22
FOXN3-219ENST00000615335 AADACL2Q6P093 401 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 FITM2Q8N6M3 262 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 WDR60Q8WVS4 1066 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 KRT35Q92764 455 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 UTP4Q969X6 686 aaKnown RBP13.65□□□□□ -0.22
FOXN3-219ENST00000615335 ZSWIM1Q9BR11 485 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 PABPC3Q9H361 631 aaKnown RBP13.65□□□□□ -0.22
FOXN3-219ENST00000615335 LRRC4CQ9HCJ2 640 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 SNTG2Q9NY99 539 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 UMODL1Q5DID0 1318 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 PTGIRP43119 386 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 C1orf220Q5T0J3 134 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 C6orf118Q5T5N4 469 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 SEL1L2Q5TEA6 688 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 DENND2CQ68D51 928 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 NXF3Q9H4D5 531 aaKnown RBP13.65□□□□□ -0.22
FOXN3-219ENST00000615335 TOPORSQ9NS56 1045 aaPredicted RBP13.65□□□□□ -0.22
FOXN3-219ENST00000615335 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 ZNF148Q9UQR1 794 aa13.65□□□□□ -0.22
FOXN3-219ENST00000615335 CITO14578 2027 aa13.65□□□□□ -0.23
FOXN3-219ENST00000615335 RGS16O15492 202 aaPredicted RBP13.64□□□□□ -0.23
FOXN3-219ENST00000615335 HNRNPRO43390 633 aaKnown RBP13.64□□□□□ -0.23
FOXN3-219ENST00000615335 HNRNPCP07910 306 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■□□□ 14.2
FOXN3-219ENST00000615335 GRM5P41594 1212 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 RASSF2P50749 326 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 CCL23P55773 120 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 SESN3P58005 492 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 MESDQ14696 234 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 TMEM259Q4ZIN3 620 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 UBXN11Q5T124 520 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 ZDHHC24Q6UX98 284 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PRELID2Q8N945 189 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 FAM13CQ8NE31 585 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 EPB41L4BQ9H329 900 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 KLHL14Q9P2G3 628 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PRKAG3Q9UGI9 489 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 TRIM33Q9UPN9 1127 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 TMED5Q9Y3A6 229 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PODXLO00592 558 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 ITGA2BP08514 1039 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 CLTBP09497 229 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 COMTP21964 271 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 CTNNA2P26232 953 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 MARCKSL1P49006 195 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 MXI1P50539 228 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
FOXN3-219ENST00000615335 SURF1Q15526 300 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 CCDC6Q16204 474 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 LIN52Q52LA3 116 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PPFIBP2Q8ND30 876 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 FBXO25Q8TCJ0 367 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 SCLYQ96I15 445 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
FOXN3-219ENST00000615335 TMEM117Q9H0C3 514 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 WNT8AQ9H1J5 351 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PARP2Q9UGN5 583 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 PCYOX1Q9UHG3 505 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 IPPQ9Y573 584 aa13.64□□□□□ -0.23
FOXN3-219ENST00000615335 BIRC5O15392 142 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 AKAP5P24588 427 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 MCCD1P59942 119 aaPredicted RBP13.63□□□□□ -0.23
FOXN3-219ENST00000615335 ENPEPQ07075 957 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 SLC10A6Q3KNW5 377 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 KRT39Q6A163 491 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 ZC3H18Q86VM9 953 aaKnown RBP13.63□□□□□ -0.23
FOXN3-219ENST00000615335 GRAMD1AQ96CP6 724 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 PCDHB18PQ96TA0 734 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 ADAM2Q99965 735 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 FAM105AQ9NUU6 356 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 GRHL1Q9NZI5 618 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 MTRF1LQ9UGC7 380 aaKnown RBP13.63□□□□□ -0.23
FOXN3-219ENST00000615335 GGT7Q9UJ14 662 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 PCDHB2Q9Y5E7 798 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 TRIP11Q15643 1979 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 PTPRJQ12913 1337 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 LACTBL1A8MY62 500 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 NBNO60934 754 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 IL18RAPO95256 599 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 GTF2H1P32780 548 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 CYP2C18P33260 490 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 RPL21P46778 160 aaKnown RBP13.63□□□□□ -0.23
FOXN3-219ENST00000615335 CD97P48960 835 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 OXCT1P55809 520 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 CLDN10P78369 228 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 CNGA2Q16280 664 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 SV2AQ7L0J3 742 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 ATP11CQ8NB49 1132 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 ZNF516Q92618 1163 aa13.63□□□□□ -0.23
FOXN3-219ENST00000615335 KAT5Q92993 513 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms