RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 FAM86B1E9PN63 330 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 FAM86B2P0C5J1 330 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 ATP1A3P13637 1013 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 KCNA2P16389 499 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 SNRPD1P62314 119 aaKnown RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 HPCAP84074 193 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 MDM2Q00987 491 aaPredicted RBP10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 CBWD2Q8IUF1 395 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 SH2D3AQ9BRG2 576 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 NEUROG2Q9H2A3 272 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 THEGQ9P2T0 379 aa10.09□□□□□ -0.79
TNFRSF9-204ENST00000615230 H3BMM5 538 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 ATP6V1E1P36543 226 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 POU5F1Q01860 360 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 TUSC3Q13454 348 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 EFTUD2Q15029 972 aaKnown RBP eCLIP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 TIGD5Q53EQ6 642 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NCLNQ969V3 563 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 KCTD5Q9NXV2 234 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SMG5Q9UPR3 1016 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 MEI4A8MW99 385 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 AKAP5P24588 427 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 CNTFP26441 200 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SERPINA4P29622 427 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 MLH1P40692 756 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 PTENP60484 403 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NNTQ13423 1086 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 PATL1Q86TB9 770 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 HS6ST3Q8IZP7 471 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAM172AQ8WUF8 416 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 GANQ9H2C0 597 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 C20orf96Q9NUD7 363 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 BTBD7Q9P203 1132 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 AP4E1Q9UPM8 1137 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 KLRG2A4D1S0 409 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 KELP23276 732 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NUP93Q8N1F7 819 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 UHMK1Q8TAS1 419 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 HASPINQ8TF76 798 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 OSBPL8Q9BZF1 889 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 PLEKHA4Q9H4M7 779 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 C10orf71Q711Q0 1435 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 ARVCFO00192 962 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 CYP11B1P15538 503 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 PON1P27169 355 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 FNTAP49354 379 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SCNN1GP51170 649 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 CFAP61Q8NHU2 1237 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 HEXDCQ8WVB3 486 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAR2Q96K12 515 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 HSFY1Q96LI6 401 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 ACO2Q99798 780 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 CLPBQ9H078 707 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SYTL2Q9HCH5 934 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 ZC3H7BQ9UGR2 993 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 KPNA5O15131 536 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 PTPN1P18031 435 aaKnown RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 CYP2A7P20853 494 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NDST1P52848 882 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 NAA20P61599 178 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 TRIM65Q6PJ69 517 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC25A41Q8N5S1 370 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 GBP7Q8N8V2 638 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 SLC30A5Q8TAD4 765 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 GRAMD1AQ96CP6 724 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 FAM105AQ9NUU6 356 aa10.08□□□□□ -0.8
TNFRSF9-204ENST00000615230 RASA4BC9J798 803 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 O00370 1275 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 RASA4O43374 803 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 ELNP15502 786 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 ITGB6P18564 788 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CD52P31358 61 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CXCR5P32302 372 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 HTR7P34969 479 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 YWHAZP63104 245 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PLCL1Q15111 1095 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PCSK7Q16549 785 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PRAMEF19Q5SWL8 479 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PI4K2AQ9BTU6 479 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 TEKT2Q9UIF3 430 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SNX24Q9Y343 169 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SUPT3HB4E1H0 165 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 OR56A5P0C7T3 313 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 CRHR2Q13324 411 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 NR1I3Q14994 352 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 MORF4L2Q15014 288 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 AMHR2Q16671 573 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PHACTR4Q8IZ21 702 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 FANCEQ9HB96 536 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 ATP13A1Q9HD20 1204 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SEPT3Q9UH03 358 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 PPP1R3GB7ZBB8 358 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SPECC1L-ADORA2AF8WAN1 911 aa10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SRP72O76094 671 aaKnown RBP10.07□□□□□ -0.8
TNFRSF9-204ENST00000615230 SERPIND1P05546 499 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms